Human vs Cow BlastZ alignments

Human (Homo sapiens, GRCh37) and Cow(Bos taurus, Btau_4.0) were aligned using the BlastZ alignment algorithm (Schwartz S et al., Genome Res.;13(1):103-7, Kent WJ et al., Proc Natl Acad Sci U S A., 2003;100(20):11484-9) in Ensembl release 55. Human was used as the reference species. After running BlastZ, the raw BlastZ alignment blocks are chained according to their location in both genomes. During the final netting process, the best sub-chain is chosen in each region on the reference species.

Full list of pairwise alignments

Configuration parameters

No configuration parameters are available

Results

Number of alignment blocks: 2253476

Genome coverage(bp) Coding exon coverage (bp)
Human
1,391,921,996 out of 3,098,825,702 34,132,234 out of 35,483,623
Cow
1,303,866,252 out of 2,918,205,644 29,248,121 out of 32,548,771