Human vs Pig BlastZ alignments

Human (Homo sapiens, GRCh37) and Pig(Sus scrofa, Sscrofa9) were aligned using the BlastZ alignment algorithm (Schwartz S et al., Genome Res.;13(1):103-7, Kent WJ et al., Proc Natl Acad Sci U S A., 2003;100(20):11484-9) in Ensembl release 56. Human was used as the reference species. After running BlastZ, the raw BlastZ alignment blocks are chained according to their location in both genomes. During the final netting process, the best sub-chain is chosen in each region on the reference species.

Full list of pairwise alignments

Configuration parameters

No configuration parameters are available

Results

Number of alignment blocks: 1902407

Genome coverage(bp) Coding exon coverage (bp)
Human
1,238,981,649 out of 3,098,825,702 30,138,617 out of 35,483,623
Pig
1,151,636,533 out of 2,262,596,414 21,857,147 out of 24,439,764