Panzer_AssemblyEngine_impl.hpp

Go to the documentation of this file.

// @HEADER
// ***********************************************************************
//
//           Panzer: A partial differential equation assembly
//       engine for strongly coupled complex multiphysics systems
//                 Copyright (2011) Sandia Corporation
//
// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
// the U.S. Government retains certain rights in this software.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Roger P. Pawlowski (rppawlo@sandia.gov) and
// Eric C. Cyr (eccyr@sandia.gov)
// ***********************************************************************
// @HEADER
 
#ifndef PANZER_ASSEMBLY_ENGINE_IMPL_HPP
#define PANZER_ASSEMBLY_ENGINE_IMPL_HPP
 
#include "Phalanx_FieldManager.hpp"
#include "Panzer_FieldManagerBuilder.hpp"
#include "Panzer_AssemblyEngine_InArgs.hpp"
#include "Panzer_GlobalEvaluationDataContainer.hpp"
#include <sstream>
 
//===========================================================================
//===========================================================================
template <typename EvalT>
panzer::AssemblyEngine<EvalT>::
AssemblyEngine(const Teuchos::RCP<panzer::FieldManagerBuilder>& fmb,
               const Teuchos::RCP<const panzer::LinearObjFactory<panzer::Traits> > & lof)
  : m_field_manager_builder(fmb), m_lin_obj_factory(lof), countersInitialized_(false)
{ 
 
}
 
//===========================================================================
//===========================================================================
template <typename EvalT>
void panzer::AssemblyEngine<EvalT>::
evaluate(const panzer::AssemblyEngineInArgs& in, const EvaluationFlags flags)
{
  typedef LinearObjContainer LOC;
 
  // make sure this container gets a dirichlet adjustment
  in.ghostedContainer_->setRequiresDirichletAdjustment(true);
 
  GlobalEvaluationDataContainer gedc;
 
  if ( flags.getValue() & EvaluationFlags::Initialize ) {
    PANZER_FUNC_TIME_MONITOR("panzer::AssemblyEngine::evaluate_gather("+PHX::typeAsString<EvalT>()+")");
 
    in.fillGlobalEvaluationDataContainer(gedc);
    gedc.initialize(); // make sure all ghosted data is ready to go
    gedc.globalToGhost(LOC::X | LOC::DxDt);
 
    // Push solution, x and dxdt into ghosted domain
    m_lin_obj_factory->globalToGhostContainer(*in.container_,*in.ghostedContainer_,LOC::X | LOC::DxDt);
    m_lin_obj_factory->beginFill(*in.ghostedContainer_);
  }
 
  // *********************
  // Volumetric fill
  // *********************
  if ( flags.getValue() & EvaluationFlags::VolumetricFill) {
    PANZER_FUNC_TIME_MONITOR("panzer::AssemblyEngine::evaluate_volume("+PHX::typeAsString<EvalT>()+")");
    this->evaluateVolume(in);
  }
 
  // *********************
  // BC fill
  // *********************
  // NOTE: We have to split neumann and dirichlet bcs since dirichlet
  // bcs overwrite equations where neumann sum into equations.  Make
  // sure all neumann are done before dirichlet.
 
  if ( flags.getValue() & EvaluationFlags::BoundaryFill) {
    {
      PANZER_FUNC_TIME_MONITOR("panzer::AssemblyEngine::evaluate_neumannbcs("+PHX::typeAsString<EvalT>()+")");
      this->evaluateNeumannBCs(in);
    }
 
    {
      PANZER_FUNC_TIME_MONITOR("panzer::AssemblyEngine::evaluate_interfacebcs("+PHX::typeAsString<EvalT>()+")");
      this->evaluateInterfaceBCs(in);
    }
 
    // Dirchlet conditions require a global matrix
    {
      PANZER_FUNC_TIME_MONITOR("panzer::AssemblyEngine::evaluate_dirichletbcs("+PHX::typeAsString<EvalT>()+")");
      this->evaluateDirichletBCs(in);
    }
  }
 
  if ( flags.getValue() & EvaluationFlags::Scatter) {
    PANZER_FUNC_TIME_MONITOR("panzer::AssemblyEngine::evaluate_scatter("+PHX::typeAsString<EvalT>()+")");
    m_lin_obj_factory->ghostToGlobalContainer(*in.ghostedContainer_,*in.container_,LOC::F | LOC::Mat);
 
    m_lin_obj_factory->beginFill(*in.container_);
    gedc.ghostToGlobal(LOC::F | LOC::Mat);
    m_lin_obj_factory->endFill(*in.container_);
 
    m_lin_obj_factory->endFill(*in.ghostedContainer_);
  }
 
  return;
}
 
//===========================================================================
//===========================================================================
template <typename EvalT>
Teuchos::RCP<panzer::LinearObjContainer> panzer::AssemblyEngine<EvalT>::
evaluateOnlyDirichletBCs(const panzer::AssemblyEngineInArgs& in)
{
  typedef LinearObjContainer LOC;
 
  // make sure this container gets a dirichlet adjustment
  in.ghostedContainer_->setRequiresDirichletAdjustment(true);
 
  GlobalEvaluationDataContainer gedc;
  in.fillGlobalEvaluationDataContainer(gedc);
  gedc.initialize(); // make sure all ghosted data is ready to go
  gedc.globalToGhost(LOC::X | LOC::DxDt);
 
  // Push solution, x and dxdt into ghosted domain
  m_lin_obj_factory->globalToGhostContainer(*in.container_,*in.ghostedContainer_,LOC::X | LOC::DxDt);
  m_lin_obj_factory->beginFill(*in.ghostedContainer_);
 
  // Dirchlet conditions require a global matrix
  Teuchos::RCP<LOC> counter = this->evaluateDirichletBCs(in);
 
  m_lin_obj_factory->ghostToGlobalContainer(*in.ghostedContainer_,*in.container_,LOC::F | LOC::Mat);
 
  m_lin_obj_factory->beginFill(*in.container_);
  gedc.ghostToGlobal(LOC::F | LOC::Mat);
  m_lin_obj_factory->endFill(*in.container_);
 
  m_lin_obj_factory->endFill(*in.ghostedContainer_);
 
  return counter;
}
 
//===========================================================================
//===========================================================================
template <typename EvalT>
void panzer::AssemblyEngine<EvalT>::
evaluateVolume(const panzer::AssemblyEngineInArgs& in)
{
  const std::vector< Teuchos::RCP< PHX::FieldManager<panzer::Traits> > > &
    volume_field_managers = m_field_manager_builder->getVolumeFieldManagers();
  const std::vector<WorksetDescriptor> & wkstDesc = m_field_manager_builder->getVolumeWorksetDescriptors();
 
  Teuchos::RCP<panzer::WorksetContainer> wkstContainer = m_field_manager_builder->getWorksetContainer();
 
  panzer::Traits::PED ped;
  ped.gedc->addDataObject("Solution Gather Container",in.ghostedContainer_);
  ped.gedc->addDataObject("Residual Scatter Container",in.ghostedContainer_);
  ped.first_sensitivities_name  = in.first_sensitivities_name;
  ped.second_sensitivities_name = in.second_sensitivities_name;
  in.fillGlobalEvaluationDataContainer(*(ped.gedc));
 
  // Loop over volume field managers
  for (std::size_t block = 0; block < volume_field_managers.size(); ++block) {
    const WorksetDescriptor & wd = wkstDesc[block];
    Teuchos::RCP< PHX::FieldManager<panzer::Traits> > fm = volume_field_managers[block];
    std::vector<panzer::Workset>& w = *wkstContainer->getWorksets(wd);
 
    fm->template preEvaluate<EvalT>(ped);
 
    // Loop over worksets in this element block
    for (std::size_t i = 0; i < w.size(); ++i) {
      panzer::Workset& workset = w[i];
 
      workset.alpha = in.alpha;
      workset.beta = in.beta;
      workset.time = in.time;
      workset.step_size = in.step_size;
      workset.stage_number = in.stage_number;
      workset.gather_seeds = in.gather_seeds;
      workset.evaluate_transient_terms = in.evaluate_transient_terms;
 
 
      fm->template evaluateFields<EvalT>(workset);
    }
 
    // double s = 0.;
    // double p = 0.;
    // fm->template analyzeGraph<EvalT>(s,p);
    // std::cout << "Analyze Graph: " << PHX::typeAsString<EvalT>() << ",b=" << block << ", s=" << s << ", p=" << p << std::endl; 
 
    fm->template postEvaluate<EvalT>(NULL);
  }
}
 
//===========================================================================
//===========================================================================
template <typename EvalT>
void panzer::AssemblyEngine<EvalT>::
evaluateNeumannBCs(const panzer::AssemblyEngineInArgs& in)
{
  this->evaluateBCs(panzer::BCT_Neumann, in);
}
 
//===========================================================================
//===========================================================================
template <typename EvalT>
void panzer::AssemblyEngine<EvalT>::
evaluateInterfaceBCs(const panzer::AssemblyEngineInArgs& in)
{
  this->evaluateBCs(panzer::BCT_Interface, in);
}
 
//===========================================================================
//===========================================================================
template <typename EvalT>
Teuchos::RCP<panzer::LinearObjContainer> panzer::AssemblyEngine<EvalT>::
evaluateDirichletBCs(const panzer::AssemblyEngineInArgs& in)
{
  typedef LinearObjContainer LOC;
 
  if(!countersInitialized_) {
    localCounter_ = m_lin_obj_factory->buildPrimitiveGhostedLinearObjContainer();
    globalCounter_ = m_lin_obj_factory->buildPrimitiveLinearObjContainer();
    summedGhostedCounter_ = m_lin_obj_factory->buildPrimitiveGhostedLinearObjContainer();
    countersInitialized_ = true;
 
    m_lin_obj_factory->initializeGhostedContainer(LinearObjContainer::F,*localCounter_); // store counter in F
    m_lin_obj_factory->initializeContainer(       LinearObjContainer::F,*globalCounter_); // store counter in X
    m_lin_obj_factory->initializeGhostedContainer(LinearObjContainer::F,*summedGhostedCounter_); // store counter in X
  }
 
  {
    localCounter_->initialize();
    summedGhostedCounter_->initialize();
    globalCounter_->initialize();
  }
 
  // apply dirichlet conditions, make sure to keep track of the local counter
  this->evaluateBCs(panzer::BCT_Dirichlet, in,localCounter_);
 
  // do communication to build summed ghosted counter for dirichlet conditions
  {
     m_lin_obj_factory->ghostToGlobalContainer(*localCounter_,*globalCounter_,LOC::F);
        // Here we do the reduction across all processors so that the number of times
        // a dirichlet condition is applied is summed into the global counter
 
     m_lin_obj_factory->globalToGhostContainer(*globalCounter_,*summedGhostedCounter_,LOC::F);
        // finally we move the summed global vector into a local ghosted vector
        // so that the dirichlet conditions can be applied to both the ghosted
        // right hand side and the ghosted matrix
  }
 
  panzer::GlobalEvaluationDataContainer gedc;
  gedc.addDataObject("Residual Scatter Container",in.ghostedContainer_);
  in.fillGlobalEvaluationDataContainer(gedc);
 
  // adjust ghosted system for boundary conditions
  for(GlobalEvaluationDataContainer::iterator itr=gedc.begin();itr!=gedc.end();itr++) {
 
    if(itr->second->requiresDirichletAdjustment()) {
      Teuchos::RCP<LinearObjContainer> loc = Teuchos::rcp_dynamic_cast<LinearObjContainer>(itr->second);
      if(loc!=Teuchos::null) {
        m_lin_obj_factory->adjustForDirichletConditions(*localCounter_,*summedGhostedCounter_,*loc);
      }
      else {
        // it was not a linear object container, so if you want an adjustment it better be a GED_BCAdjustment object
        Teuchos::RCP<GlobalEvaluationData_BCAdjustment> bc_adjust = Teuchos::rcp_dynamic_cast<GlobalEvaluationData_BCAdjustment>(itr->second,true);
        bc_adjust->adjustForDirichletConditions(*localCounter_,*summedGhostedCounter_);
      }
    }
  }
 
  return globalCounter_;
}
 
//===========================================================================
//===========================================================================
template <typename EvalT>
void panzer::AssemblyEngine<EvalT>::
evaluateBCs(const panzer::BCType bc_type,
            const panzer::AssemblyEngineInArgs& in,
            const Teuchos::RCP<LinearObjContainer> preEval_loc)
{
  Teuchos::RCP<panzer::WorksetContainer> wkstContainer = m_field_manager_builder->getWorksetContainer();
 
  panzer::Traits::PED ped;
  ped.gedc->addDataObject("Dirichlet Counter",preEval_loc);
  ped.gedc->addDataObject("Solution Gather Container",in.ghostedContainer_);
  ped.gedc->addDataObject("Residual Scatter Container",in.ghostedContainer_);
  ped.first_sensitivities_name  = in.first_sensitivities_name;
  ped.second_sensitivities_name = in.second_sensitivities_name;
  in.fillGlobalEvaluationDataContainer(*(ped.gedc));
 
  // this helps work around issues when constructing a mass
  // matrix using an evaluation of only the transient terms.
  // In particular, the terms associated with the dirichlet
  // conditions.
  double betaValue = in.beta; // default to the passed in beta
  if(bc_type==panzer::BCT_Dirichlet && in.apply_dirichlet_beta) {
    betaValue = in.dirichlet_beta;
  }
 
  {
    const std::map<panzer::BC, 
      std::map<unsigned,PHX::FieldManager<panzer::Traits> >,
      panzer::LessBC>& bc_field_managers = 
      m_field_manager_builder->getBCFieldManagers();
  
    // Must do all neumann before all dirichlet so we need a double loop
    // here over all bcs
    typedef typename std::map<panzer::BC, 
      std::map<unsigned,PHX::FieldManager<panzer::Traits> >,
      panzer::LessBC>::const_iterator bcfm_it_type;
 
    // loop over bcs
    for (bcfm_it_type bcfm_it = bc_field_managers.begin(); 
         bcfm_it != bc_field_managers.end(); ++bcfm_it) {
      
      const panzer::BC& bc = bcfm_it->first;
      const std::map<unsigned,PHX::FieldManager<panzer::Traits> > bc_fm = 
        bcfm_it->second;
   
      panzer::WorksetDescriptor desc = panzer::bcDescriptor(bc);
      Teuchos::RCP<const std::map<unsigned,panzer::Workset> > bc_wkst_ptr = wkstContainer->getSideWorksets(desc);
      TEUCHOS_TEST_FOR_EXCEPTION(bc_wkst_ptr == Teuchos::null, std::logic_error,
                         "Failed to find corresponding bc workset!");
      const std::map<unsigned,panzer::Workset>& bc_wkst = *bc_wkst_ptr;
 
      // Only process bcs of the appropriate type (neumann or dirichlet)
      if (bc.bcType() == bc_type) {
        std::ostringstream timerName;
        timerName << "panzer::AssemblyEngine::evaluateBCs: " << bc.identifier();
        PANZER_FUNC_TIME_MONITOR(timerName.str());
 
        // Loop over local faces
        for (std::map<unsigned,PHX::FieldManager<panzer::Traits> >::const_iterator side = bc_fm.begin(); side != bc_fm.end(); ++side) {
          std::ostringstream timerSideName;
          timerSideName << "panzer::AssemblyEngine::evaluateBCs: " << bc.identifier() << ", side=" << side->first;
          PANZER_FUNC_TIME_MONITOR(timerSideName.str());
 
          // extract field manager for this side  
          unsigned local_side_index = side->first;
          PHX::FieldManager<panzer::Traits>& local_side_fm = 
            const_cast<PHX::FieldManager<panzer::Traits>& >(side->second);
          
          // extract workset for this side: only one workset per face
          std::map<unsigned,panzer::Workset>::const_iterator wkst_it = 
            bc_wkst.find(local_side_index);
          
          TEUCHOS_TEST_FOR_EXCEPTION(wkst_it == bc_wkst.end(), std::logic_error,
                             "Failed to find corresponding bc workset side!");
          
          panzer::Workset& workset = 
            const_cast<panzer::Workset&>(wkst_it->second); 
 
          // run prevaluate
          local_side_fm.template preEvaluate<EvalT>(ped);
 
          // build and evaluate fields for the workset: only one workset per face
          workset.alpha = in.alpha;
          workset.beta = betaValue;
          workset.time = in.time;
          workset.gather_seeds = in.gather_seeds;
          workset.evaluate_transient_terms = in.evaluate_transient_terms;
          
          local_side_fm.template evaluateFields<EvalT>(workset);
 
          // run postevaluate for consistency
          local_side_fm.template postEvaluate<EvalT>(NULL);
          
        }
      }
    } 
  }
 
}
 
#endif