Index

A

abs() (dolfin.cpp.la.GenericVector method) access_count() (dolfin.cpp.common.ParameterValue method) adapt() (in module dolfin.cpp.fem) adapt_markers() (in module dolfin.cpp.fem) adapt_problem() (dolfin.cpp.fem.GenericAdaptiveVariationalSolver method) adaptive_data() (dolfin.cpp.fem.GenericAdaptiveVariationalSolver method) AdaptiveLinearVariationalSolver (class in dolfin.cpp.fem) (class in dolfin.fem.adaptivesolving) AdaptiveNonlinearVariationalSolver (class in dolfin.cpp.fem) (class in dolfin.fem.adaptivesolving) add() (dolfin.cpp.common.Parameters method) (dolfin.cpp.fem.MultiMeshDofMap method) (dolfin.cpp.fem.MultiMeshForm method) (dolfin.cpp.function.MultiMeshFunctionSpace method) (dolfin.cpp.la.GenericMatrix method) (dolfin.cpp.la.GenericTensor method) (dolfin.cpp.la.GenericVector method) (dolfin.cpp.mesh.MultiMesh method) add_cell() (dolfin.cpp.mesh.DynamicMeshEditor method) (dolfin.cpp.mesh.MeshEditor method) add_entity_point() (dolfin.cpp.mesh.MeshEditor method) add_local() (dolfin.cpp.la.EigenVector method) (dolfin.cpp.la.GenericMatrix method) (dolfin.cpp.la.GenericTensor method) (dolfin.cpp.la.GenericVector method) (dolfin.cpp.la.PETScVector method) (dolfin.cpp.la.Scalar method) (dolfin.cpp.la.Vector method) add_local_value() (dolfin.cpp.la.Scalar method) add_polygon() (dolfin.cpp.io.VTKPlotter method) add_values (dolfin.cpp.fem.AssemblerBase attribute) add_vertex() (dolfin.cpp.mesh.DynamicMeshEditor method) (dolfin.cpp.mesh.MeshEditor method) add_vertex_global() (dolfin.cpp.mesh.MeshEditor method) adjoint() (in module dolfin.fem.formmanipulations) ALE (class in dolfin.cpp.function) ALE_move() (in module dolfin.cpp.function) all_interactive() (dolfin.cpp.io.VTKPlotter static method) apply() (dolfin.cpp.fem.DirichletBC method) (dolfin.cpp.fem.MultiMeshDirichletBC method) (dolfin.cpp.fem.PointSource method) (dolfin.cpp.la.BlockMatrix method) (dolfin.cpp.la.GenericTensor method) (dolfin.cpp.la.SparsityPattern method) area() (dolfin.cpp.mesh.Face method)

Argument (class in dolfin.functions.function) array() (dolfin.cpp.common.DoubleArray method) (dolfin.cpp.common.IntArray method) (dolfin.cpp.common.UIntArray method) (dolfin.cpp.la.GenericMatrix method) (dolfin.cpp.la.GenericVector method) (dolfin.cpp.mesh.MeshData method) (dolfin.cpp.mesh.MeshFunctionBool method) (dolfin.cpp.mesh.MeshFunctionDouble method) (dolfin.cpp.mesh.MeshFunctionInt method) (dolfin.cpp.mesh.MeshFunctionSizet method) as_backend_type() (in module dolfin.cpp.la) assemble() (dolfin.cpp.fem.Assembler method) (dolfin.cpp.fem.LocalAssembler static method) (dolfin.cpp.fem.MultiMeshAssembler method) (dolfin.cpp.fem.OpenMpAssembler method) (dolfin.cpp.fem.SystemAssembler method) (in module dolfin.cpp.fem) (in module dolfin.fem.assembling) assemble_cell() (dolfin.cpp.fem.LocalAssembler static method) assemble_cells() (dolfin.cpp.fem.Assembler method) assemble_exterior_facet() (dolfin.cpp.fem.LocalAssembler static method) assemble_exterior_facets() (dolfin.cpp.fem.Assembler method) assemble_interior_facet() (dolfin.cpp.fem.LocalAssembler static method) assemble_interior_facets() (dolfin.cpp.fem.Assembler method) assemble_local() (in module dolfin.cpp.fem) (in module dolfin.fem.assembling_local) assemble_multimesh() (in module dolfin.cpp.fem) (in module dolfin.fem.assembling) assemble_system() (in module dolfin.cpp.fem) (in module dolfin.fem.assembling) assemble_vertices() (dolfin.cpp.fem.Assembler method) Assembler (class in dolfin.cpp.fem) AssemblerBase (class in dolfin.cpp.fem) assign() (dolfin.cpp.common.Parameters method) (dolfin.cpp.function.Constant method) (dolfin.cpp.function.FunctionAssigner method) (dolfin.cpp.function.FunctionSpace method) (dolfin.cpp.la.EigenMatrix method) (dolfin.cpp.la.GenericMatrix method) (dolfin.cpp.la.Matrix method) (dolfin.cpp.la.PETScMatrix method) (dolfin.cpp.mesh.MeshValueCollectionBool method) (dolfin.cpp.mesh.MeshValueCollectionDouble method) (dolfin.cpp.mesh.MeshValueCollectionInt method) (dolfin.cpp.mesh.MeshValueCollectionSizet method) (dolfin.functions.function.Function method) (dolfin.functions.multimeshfunction.MultiMeshFunction method) (in module dolfin.cpp.function) attributes() (dolfin.cpp.io.HDF5File method) automatic differentiation derivative AutoSubDomain (class in dolfin.fem.bcs) avg() (dolfin.cpp.common.MPI static method) axpy() (dolfin.cpp.la.BlockVector method) (dolfin.cpp.la.GenericMatrix method) (dolfin.cpp.la.GenericVector method) azimuth() (dolfin.cpp.io.VTKPlotter method)

B

BackwardEuler (in module dolfin.multistage.multistagescheme) barrier() (dolfin.cpp.common.MPI static method) base_one() (dolfin.cpp.la.CoordinateMatrix method) BasisFunction (class in dolfin.cpp.fem) bcs() (dolfin.cpp.fem.LinearVariationalProblem method) (dolfin.cpp.fem.MultiStageScheme method) (dolfin.cpp.fem.NonlinearVariationalProblem method) BDF1 (class in dolfin.multistage.multistagescheme) begin() (in module dolfin.cpp.common) between() (in module dolfin.cpp.function) bilinear_form() (dolfin.cpp.fem.LinearVariationalProblem method) binary_dump() (dolfin.cpp.la.PETScMatrix method) block_size() (dolfin.cpp.fem.GenericDofMap method) (dolfin.cpp.la.IndexMap method) BlockMatrix (class in dolfin.cpp.la) BlockVector (class in dolfin.cpp.la) BoolParameter (class in dolfin.cpp.common) BoostGraphOrdering (class in dolfin.cpp.mesh)

BoostGraphOrdering_compute_cuthill_mckee() (in module dolfin.cpp.mesh) BoundaryMesh (class in dolfin.cpp.mesh) bounding_box_tree() (dolfin.cpp.mesh.Mesh method) (dolfin.cpp.mesh.MultiMesh method) bounding_box_tree_boundary() (dolfin.cpp.mesh.MultiMesh method) BoundingBoxTree (class in dolfin.cpp.mesh) BoundingBoxTree3D (class in dolfin.cpp.mesh) BoxMesh (class in dolfin.cpp.mesh) Brezzi-Douglas-Marini FunctionSpace broadcast_mesh_data() (dolfin.cpp.mesh.LocalMeshData method) build() (dolfin.cpp.fem.MultiMeshDofMap method) (dolfin.cpp.fem.MultiMeshForm method) (dolfin.cpp.fem.SparsityPatternBuilder static method) (dolfin.cpp.function.MultiMeshFunctionSpace method) (dolfin.cpp.mesh.BoundingBoxTree method) (dolfin.cpp.mesh.GenericBoundingBoxTree method) (dolfin.cpp.mesh.MultiMesh method) build_distributed_mesh() (dolfin.cpp.mesh.MeshPartitioning static method) build_gradient() (dolfin.cpp.fem.DiscreteOperators static method) build_multimesh_sparsity_pattern() (dolfin.cpp.fem.SparsityPatternBuilder static method) build_x3dom_tree() (dolfin.cpp.io.X3DOM static method) ButcherMultiStageScheme (class in dolfin.multistage.multistagescheme)

C

Cell (class in dolfin.cpp.mesh) cell() (dolfin.functions.constant.Constant method) cell_colors() (dolfin.cpp.mesh.MeshColoring static method) cell_dimension() (dolfin.cpp.fem.GenericDofMap method) cell_dofs() (dolfin.cpp.fem.GenericDofMap method) cell_domains() (dolfin.cpp.fem.Form method) cell_normal() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method) cell_orientations() (dolfin.cpp.mesh.Mesh method) cell_owner() (dolfin.cpp.mesh.MeshTopology method) cell_shape (dolfin.cpp.common.ufc_cell attribute) (dolfin.cpp.fem.ufc_cell attribute) (dolfin.cpp.function.ufc_cell attribute) (dolfin.cpp.io.ufc_cell attribute) (dolfin.cpp.la.ufc_cell attribute) (dolfin.cpp.mesh.ufc_cell attribute) cell_shape() (dolfin.cpp.fem.FiniteElement method) cell_type() (dolfin.cpp.mesh.CellType method) CellFunction (class in dolfin.cpp.mesh) CellFunctionBool (class in dolfin.cpp.mesh) CellFunctionDouble (class in dolfin.cpp.mesh) CellFunctionInt (class in dolfin.cpp.mesh) CellFunctionSizet (class in dolfin.cpp.mesh) CellNormal() (in module dolfin.functions.specialfunctions) cells (class in dolfin.cpp.mesh) cells() (dolfin.cpp.mesh.Mesh method) CellSize() (in module dolfin.functions.specialfunctions) CellType (class in dolfin.cpp.mesh) CellType_create() (in module dolfin.cpp.mesh) CellType_string2type() (in module dolfin.cpp.mesh) CellType_type2string() (in module dolfin.cpp.mesh) CellVolume() (in module dolfin.functions.specialfunctions) change_count() (dolfin.cpp.common.ParameterValue method) check() (dolfin.cpp.fem.Form method) (dolfin.cpp.mesh.LocalMeshData method) check_key() (dolfin.cpp.common.ParameterValue static method) child() (dolfin.cpp.fem.HierarchicalDirichletBC method) (dolfin.cpp.fem.HierarchicalErrorControl method) (dolfin.cpp.fem.HierarchicalForm method) (dolfin.cpp.fem.HierarchicalLinearVariationalProblem method) (dolfin.cpp.fem.HierarchicalNonlinearVariationalProblem method) (dolfin.cpp.function.Function method) (dolfin.cpp.function.FunctionSpace method) (dolfin.cpp.mesh.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalMeshFunctionBool method) (dolfin.cpp.mesh.HierarchicalMeshFunctionDouble method) (dolfin.cpp.mesh.HierarchicalMeshFunctionInt method) (dolfin.cpp.mesh.HierarchicalMeshFunctionSizet method) circumradius() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method) Circumradius() (in module dolfin.functions.specialfunctions) clean() (dolfin.cpp.mesh.Mesh method) clear() (dolfin.cpp.common.IndexSet method) (dolfin.cpp.common.Parameters method) (dolfin.cpp.fem.MultiMeshDofMap method) (dolfin.cpp.fem.MultiMeshForm method) (dolfin.cpp.fem.TimeSeries method) (dolfin.cpp.la.PETScOptions static method) (dolfin.cpp.mesh.LocalMeshData method) (dolfin.cpp.mesh.MeshConnectivity method) (dolfin.cpp.mesh.MeshData method) (dolfin.cpp.mesh.MeshDomains method) (dolfin.cpp.mesh.MeshTopology method) (dolfin.cpp.mesh.MeshValueCollectionBool method) (dolfin.cpp.mesh.MeshValueCollectionDouble method) (dolfin.cpp.mesh.MeshValueCollectionInt method) (dolfin.cpp.mesh.MeshValueCollectionSizet method) (dolfin.cpp.mesh.MultiMesh method) clear_child() (dolfin.cpp.fem.HierarchicalDirichletBC method) (dolfin.cpp.fem.HierarchicalErrorControl method) (dolfin.cpp.fem.HierarchicalForm method) (dolfin.cpp.fem.HierarchicalFunction method) (dolfin.cpp.fem.HierarchicalFunctionSpace method) (dolfin.cpp.fem.HierarchicalLinearVariationalProblem method) (dolfin.cpp.fem.HierarchicalMesh method) (dolfin.cpp.fem.HierarchicalNonlinearVariationalProblem method) (dolfin.cpp.function.HierarchicalFunction method) (dolfin.cpp.function.HierarchicalFunctionSpace method) (dolfin.cpp.function.HierarchicalMesh method) (dolfin.cpp.io.HierarchicalFunction method) (dolfin.cpp.io.HierarchicalFunctionSpace method) (dolfin.cpp.io.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalFunction method) (dolfin.cpp.mesh.HierarchicalFunctionSpace method) (dolfin.cpp.mesh.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalMeshFunctionBool method) (dolfin.cpp.mesh.HierarchicalMeshFunctionDouble method) (dolfin.cpp.mesh.HierarchicalMeshFunctionInt method) (dolfin.cpp.mesh.HierarchicalMeshFunctionSizet method) (dolfin.cpp.mesh.HierarchicalMeshFunctionUInt method) clear_factorization() (dolfin.cpp.fem.LocalSolver method) clear_sub_map_data() (dolfin.cpp.fem.GenericDofMap method) close() (dolfin.cpp.io.HDF5File method) (dolfin.cpp.mesh.DynamicMeshEditor method) (dolfin.cpp.mesh.MeshEditor method) CN2 (class in dolfin.multistage.multistagescheme) coarsen() (dolfin.cpp.mesh.MeshHierarchy method) coarsest() (dolfin.cpp.mesh.MeshHierarchy method) coefficient() (dolfin.cpp.fem.Form method) coefficient_name() (dolfin.cpp.fem.Form method) coefficient_number() (dolfin.cpp.fem.Form method) coefficients() (dolfin.cpp.fem.Form method) collapse() (dolfin.cpp.fem.GenericDofMap method) (dolfin.cpp.function.FunctionSpace method) (dolfin.functions.functionspace.FunctionSpace method) collides() (dolfin.cpp.mesh.BoundingBoxTree method) (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method) collides_entity() (dolfin.cpp.mesh.BoundingBoxTree method) collision_map_cut_cells() (dolfin.cpp.mesh.MultiMesh method) color() (dolfin.cpp.mesh.Mesh method) (dolfin.cpp.mesh.MeshColoring static method) color_cells() (dolfin.cpp.mesh.MeshColoring static method) coloring (dolfin.cpp.mesh.MeshTopology attribute) coloring() (dolfin.cpp.fem.Form method) columns() (dolfin.cpp.la.CoordinateMatrix method)

compile_expressions() (in module dolfin.compilemodules.expressions) compile_extension_module() (in module dolfin.compilemodules.compilemodule) compiled expression compiled subdomain CompiledSubDomain() (in module dolfin.compilemodules.subdomains) component() (dolfin.cpp.function.FunctionSpace method) compress() (dolfin.cpp.la.EigenMatrix method) compute_cell_residual() (dolfin.cpp.fem.ErrorControl method) compute_closest_entity() (dolfin.cpp.mesh.BoundingBoxTree method) (dolfin.cpp.mesh.GenericBoundingBoxTree method) compute_closest_point() (dolfin.cpp.mesh.BoundingBoxTree method) (dolfin.cpp.mesh.GenericBoundingBoxTree method) compute_collisions() (dolfin.cpp.mesh.BoundingBoxTree method) (dolfin.cpp.mesh.GenericBoundingBoxTree method) compute_colors() (dolfin.cpp.mesh.MeshColoring static method) compute_cuthill_mckee() (dolfin.cpp.mesh.BoostGraphOrdering static method) compute_dual() (dolfin.cpp.fem.ErrorControl method) compute_edge_map() (in module dolfin.mesh.ale) compute_entity_collisions() (dolfin.cpp.mesh.BoundingBoxTree method) (dolfin.cpp.mesh.GenericBoundingBoxTree method) compute_extrapolation() (dolfin.cpp.fem.ErrorControl method) compute_facet_residual() (dolfin.cpp.fem.ErrorControl method) compute_first_collision() (dolfin.cpp.mesh.BoundingBoxTree method) (dolfin.cpp.mesh.GenericBoundingBoxTree method) compute_first_entity_collision() (dolfin.cpp.mesh.BoundingBoxTree method) (dolfin.cpp.mesh.GenericBoundingBoxTree method) compute_gps() (dolfin.cpp.mesh.SCOTCH static method) compute_indicators() (dolfin.cpp.fem.ErrorControl method) compute_local_range() (dolfin.cpp.common.MPI static method) compute_periodic_pairs() (dolfin.cpp.mesh.PeriodicBoundaryComputation static method) compute_process_collisions() (dolfin.cpp.mesh.BoundingBoxTree method) (dolfin.cpp.mesh.GenericBoundingBoxTree method) compute_reordering() (dolfin.cpp.mesh.SCOTCH static method) compute_vertex_map() (in module dolfin.mesh.ale) compute_vertex_values() (dolfin.cpp.function.Function method) (dolfin.cpp.function.GenericFunction method) Constant (class in dolfin.cpp.function) (class in dolfin.functions.constant) constrained_domain (dolfin.cpp.fem.GenericDofMap attribute) contains() (dolfin.cpp.function.FunctionSpace method) (dolfin.cpp.mesh.Cell method) converged() (dolfin.cpp.la.NewtonSolver method) CoordinateMatrix (class in dolfin.cpp.la) coordinates() (dolfin.cpp.mesh.Mesh method) (dolfin.cpp.mesh.Point method) copy() (dolfin.cpp.common.Parameters method) (dolfin.cpp.fem.GenericDofMap method) (dolfin.cpp.function.Function method) (dolfin.cpp.function.MultiMeshFunction method) (dolfin.cpp.la.BlockVector method) (dolfin.cpp.la.GenericMatrix method) (dolfin.cpp.la.GenericVector method) (dolfin.cpp.la.Scalar method) count() (dolfin.cpp.common.Event method) covered_cells() (dolfin.cpp.mesh.MultiMesh method) CrankNicolson (in module dolfin.multistage.multistagescheme) create() (dolfin.cpp.fem.FiniteElement method) (dolfin.cpp.fem.GenericDofMap method) (dolfin.cpp.mesh.CellType static method) (dolfin.cpp.mesh.GenericBoundingBoxTree static method) create_array() (dolfin.cpp.mesh.MeshData method) create_entities() (dolfin.cpp.mesh.CellType method) create_krylov_solver() (dolfin.cpp.la.GenericLinearAlgebraFactory method) create_layout() (dolfin.cpp.la.GenericLinearAlgebraFactory method) create_linear_operator() (dolfin.cpp.la.GenericLinearAlgebraFactory method) create_lu_solver() (dolfin.cpp.la.GenericLinearAlgebraFactory method) create_maps() (in module dolfin.mesh.boundarysubdomainfinder) create_matrix() (dolfin.cpp.la.GenericLinearAlgebraFactory method) create_mesh() (in module dolfin.cpp.fem) create_parent_path() (dolfin.cpp.io.File static method) create_sub_element() (dolfin.cpp.fem.FiniteElement method) create_vector() (dolfin.cpp.la.GenericLinearAlgebraFactory method) cross() (dolfin.cpp.mesh.Point method) cut_cells() (dolfin.cpp.mesh.MultiMesh method)

D

d2dx() (dolfin.cpp.function.Legendre static method) data() (dolfin.cpp.common.DoubleArray method) (dolfin.cpp.common.IntArray method) (dolfin.cpp.common.ParameterValue method) (dolfin.cpp.common.UIntArray method) (dolfin.cpp.la.EigenMatrix method) (dolfin.cpp.la.EigenVector method) (dolfin.cpp.mesh.Mesh method) ddx() (dolfin.cpp.function.Lagrange method) (dolfin.cpp.function.Legendre static method) debug() (in module dolfin.cpp.common) default_parameters() (dolfin.cpp.common.GlobalParameters static method) (dolfin.cpp.fem.DirichletBC static method) (dolfin.cpp.fem.ErrorControl static method) (dolfin.cpp.fem.GenericAdaptiveVariationalSolver static method) (dolfin.cpp.fem.LinearVariationalSolver static method) (dolfin.cpp.fem.NonlinearVariationalSolver static method) (dolfin.cpp.fem.PointIntegralSolver static method) (dolfin.cpp.fem.TimeSeries static method) (dolfin.cpp.io.VTKPlotter static method) (dolfin.cpp.la.EigenKrylovSolver static method) (dolfin.cpp.la.EigenLUSolver static method) (dolfin.cpp.la.KrylovSolver static method) (dolfin.cpp.la.LUSolver static method) (dolfin.cpp.la.LinearSolver static method) (dolfin.cpp.la.NewtonSolver static method) (dolfin.cpp.la.PETScKrylovSolver static method) (dolfin.cpp.la.PETScLUSolver static method) (dolfin.cpp.la.PETScSNESSolver static method) (dolfin.cpp.la.PETScTAOSolver static method) (dolfin.cpp.la.SLEPcEigenSolver static method) (dolfin.cpp.la.TAOLinearBoundSolver static method) (dolfin.fem.solving.LinearVariationalSolver static method) (dolfin.fem.solving.NonlinearVariationalSolver static method) DefaultFactory (class in dolfin.cpp.la) DefaultFactory_factory() (in module dolfin.cpp.la) degree() (dolfin.cpp.function.Lagrange method) (dolfin.cpp.mesh.MeshGeometry method) deprecation() (in module dolfin.cpp.common) depth() (dolfin.cpp.fem.HierarchicalDirichletBC method) (dolfin.cpp.fem.HierarchicalErrorControl method) (dolfin.cpp.fem.HierarchicalForm method) (dolfin.cpp.fem.HierarchicalFunction method) (dolfin.cpp.fem.HierarchicalFunctionSpace method) (dolfin.cpp.fem.HierarchicalLinearVariationalProblem method) (dolfin.cpp.fem.HierarchicalMesh method) (dolfin.cpp.fem.HierarchicalNonlinearVariationalProblem method) (dolfin.cpp.function.HierarchicalFunction method) (dolfin.cpp.function.HierarchicalFunctionSpace method) (dolfin.cpp.function.HierarchicalMesh method) (dolfin.cpp.io.HierarchicalFunction method) (dolfin.cpp.io.HierarchicalFunctionSpace method) (dolfin.cpp.io.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalFunction method) (dolfin.cpp.mesh.HierarchicalFunctionSpace method) (dolfin.cpp.mesh.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalMeshFunctionBool method) (dolfin.cpp.mesh.HierarchicalMeshFunctionDouble method) (dolfin.cpp.mesh.HierarchicalMeshFunctionInt method) (dolfin.cpp.mesh.HierarchicalMeshFunctionSizet method) (dolfin.cpp.mesh.HierarchicalMeshFunctionUInt method) derivative() (in module dolfin.fem.formmanipulations) description() (dolfin.cpp.common.ParameterValue method) (dolfin.cpp.mesh.CellType method) dihedral_angles() (dolfin.cpp.mesh.MeshQuality static method) dihedral_angles_histogram_data() (dolfin.cpp.mesh.MeshQuality static method) dihedral_angles_matplotlib_histogram() (dolfin.cpp.mesh.MeshQuality static method) dihedral_angles_min_max() (dolfin.cpp.mesh.MeshQuality static method) dim() (dolfin.cpp.function.FunctionSpace method) (dolfin.cpp.function.MultiMeshFunctionSpace method) (dolfin.cpp.la.VectorSpaceBasis method) (dolfin.cpp.mesh.CellType method) (dolfin.cpp.mesh.MeshEntity method) (dolfin.cpp.mesh.MeshFunctionBool method) (dolfin.cpp.mesh.MeshFunctionDouble method) (dolfin.cpp.mesh.MeshFunctionInt method) (dolfin.cpp.mesh.MeshFunctionSizet method) (dolfin.cpp.mesh.MeshGeometry method) (dolfin.cpp.mesh.MeshTopology method) (dolfin.cpp.mesh.MeshValueCollectionBool method) (dolfin.cpp.mesh.MeshValueCollectionDouble method) (dolfin.cpp.mesh.MeshValueCollectionInt method) (dolfin.cpp.mesh.MeshValueCollectionSizet method) Direction_ADD_ADD (dolfin.cpp.function.FunctionAXPY attribute) Direction_ADD_SUB (dolfin.cpp.function.FunctionAXPY attribute) Direction_SUB_ADD (dolfin.cpp.function.FunctionAXPY attribute) Direction_SUB_SUB (dolfin.cpp.function.FunctionAXPY attribute) directional derivative derivative DirichletBC (class in dolfin.cpp.fem) (class in dolfin.fem.bcs) DirichletBC_default_parameters() (in module dolfin.cpp.fem) Discontinous Lagrange FunctionSpace DiscreteOperators (class in dolfin.cpp.fem) DiscreteOperators_build_gradient() (in module dolfin.cpp.fem) distance() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.Facet method) (dolfin.cpp.mesh.Point method) dof_to_vertex_map() (in module dolfin.cpp.fem) DofMap (class in dolfin.cpp.fem) dofmap() (dolfin.cpp.function.FunctionSpace method) (dolfin.cpp.function.MultiMeshFunctionSpace method) dofs() (dolfin.cpp.fem.DofMap method) (dolfin.cpp.fem.GenericDofMap method) dolfin (module) dolfin.common (module) dolfin.common.constants (module) dolfin.common.globalparameters (module) dolfin.common.math (module) dolfin.common.memory (module) dolfin.common.plotting (module) dolfin.common.time (module) dolfin.compilemodules (module) dolfin.compilemodules.compilemodule (module) dolfin.compilemodules.expressions (module) dolfin.compilemodules.jit (module) dolfin.compilemodules.subdomains (module) dolfin.compilemodules.swigimportinfo (module) dolfin.cpp (module) dolfin.cpp.common (module) dolfin.cpp.fem (module) dolfin.cpp.function (module) dolfin.cpp.io (module) dolfin.cpp.la (module)

dolfin.cpp.mesh (module) dolfin.deprecation (module) dolfin.fem (module) dolfin.fem.adaptivesolving (module) dolfin.fem.assembling (module) dolfin.fem.assembling_local (module) dolfin.fem.bcs (module) dolfin.fem.errorcontrolgenerator (module) dolfin.fem.form (module) dolfin.fem.formmanipulations (module) dolfin.fem.interpolation (module) dolfin.fem.norms (module) dolfin.fem.projection (module) dolfin.fem.solving (module) dolfin.functions (module) dolfin.functions.constant (module) dolfin.functions.expression (module) dolfin.functions.function (module) dolfin.functions.functionspace (module) dolfin.functions.multimeshfunction (module) dolfin.functions.specialfunctions (module) dolfin.importhandler (module) dolfin.mesh (module) dolfin.mesh.ale (module) dolfin.mesh.boundarysubdomainfinder (module) dolfin.mesh.meshes (module) dolfin.mesh.refinement (module) dolfin.mesh.svgtools (module) dolfin.multistage (module) dolfin.multistage.factorize (module) dolfin.multistage.multistagescheme (module) dolfin.multistage.multistagesolvers (module) dolfin.multistage.rushlarsenschemes (module) dolfin_element() (dolfin.functions.functionspace.FunctionSpace method) dolfin_error() (in module dolfin.cpp.common) dolfin_stage_forms() (dolfin.multistage.multistagescheme.MultiStageScheme method) (dolfin.multistage.rushlarsenschemes.MultiStageScheme method) dolfin_version() (in module dolfin.cpp.common) DOLFINErrorControlGenerator (class in dolfin.fem.errorcontrolgenerator) dolly() (dolfin.cpp.io.VTKPlotter method) domain_data (dolfin.cpp.mesh.LocalMeshData attribute) DomainBoundary (class in dolfin.cpp.mesh) domains() (dolfin.cpp.mesh.Mesh method) dorfler_mark() (in module dolfin.cpp.fem) dot() (dolfin.cpp.mesh.Edge method) (dolfin.cpp.mesh.Point method) DoubleArray (class in dolfin.cpp.common) DoubleParameter (class in dolfin.cpp.common) dqdx() (dolfin.cpp.function.Lagrange method) dt() (dolfin.multistage.multistagescheme.MultiStageScheme method) (dolfin.multistage.rushlarsenschemes.MultiStageScheme method) dt_stage_offset() (dolfin.cpp.fem.MultiStageScheme method) dump_timings_to_xml() (in module dolfin.cpp.common) DynamicMeshEditor (class in dolfin.cpp.mesh)

E

Edge (class in dolfin.cpp.mesh) EdgeFunction (class in dolfin.cpp.mesh) EdgeFunctionBool (class in dolfin.cpp.mesh) EdgeFunctionDouble (class in dolfin.cpp.mesh) EdgeFunctionInt (class in dolfin.cpp.mesh) EdgeFunctionSizet (class in dolfin.cpp.mesh) edges (class in dolfin.cpp.mesh) EigenFactory (class in dolfin.cpp.la) EigenFactory_instance() (in module dolfin.cpp.la) EigenKrylovSolver (class in dolfin.cpp.la) EigenKrylovSolver_default_parameters() (in module dolfin.cpp.la) EigenKrylovSolver_methods() (in module dolfin.cpp.la) EigenKrylovSolver_preconditioners() (in module dolfin.cpp.la) EigenLUSolver (class in dolfin.cpp.la) EigenLUSolver_default_parameters() (in module dolfin.cpp.la) EigenLUSolver_methods() (in module dolfin.cpp.la) EigenMatrix (class in dolfin.cpp.la) EigenVector (class in dolfin.cpp.la) elapsed() (dolfin.cpp.common.Timer method) element() (dolfin.cpp.function.FunctionSpace method) elevate() (dolfin.cpp.io.VTKPlotter method) empty() (dolfin.cpp.common.IndexSet method) (dolfin.cpp.la.BlockVector method) (dolfin.cpp.la.GenericTensor method) (dolfin.cpp.mesh.MeshConnectivity method) (dolfin.cpp.mesh.MeshFunctionBool method) (dolfin.cpp.mesh.MeshFunctionDouble method) (dolfin.cpp.mesh.MeshFunctionInt method) (dolfin.cpp.mesh.MeshFunctionSizet method) (dolfin.cpp.mesh.MeshValueCollectionBool method) (dolfin.cpp.mesh.MeshValueCollectionDouble method) (dolfin.cpp.mesh.MeshValueCollectionInt method) (dolfin.cpp.mesh.MeshValueCollectionSizet method) Encoding_ASCII (dolfin.cpp.io.XDMFFile attribute) Encoding_HDF5 (dolfin.cpp.io.XDMFFile attribute) end() (dolfin.cpp.mesh.cells method) (dolfin.cpp.mesh.SubsetIterator method) (dolfin.cpp.mesh.edges method) (dolfin.cpp.mesh.entities method) (dolfin.cpp.mesh.faces method) (dolfin.cpp.mesh.facets method) (dolfin.cpp.mesh.vertices method) (in module dolfin.cpp.common) end_iterator() (dolfin.cpp.mesh.cells method) (dolfin.cpp.mesh.SubsetIterator method) (dolfin.cpp.mesh.edges method) (dolfin.cpp.mesh.entities method) (dolfin.cpp.mesh.faces method) (dolfin.cpp.mesh.facets method) (dolfin.cpp.mesh.vertices method) entities (class in dolfin.cpp.mesh) entities() (dolfin.cpp.mesh.MeshEntity method) entity_map() (dolfin.cpp.mesh.BoundaryMesh method) entity_type() (dolfin.cpp.mesh.CellType method) eps() (dolfin.cpp.la.SLEPcEigenSolver method) Equation (class in dolfin.cpp.fem) erase_array() (dolfin.cpp.mesh.MeshData method) ERK (in module dolfin.multistage.multistagescheme) ERK1 (class in dolfin.multistage.multistagescheme) ERK4 (class in dolfin.multistage.multistagescheme)

error() (in module dolfin.cpp.common) ErrorControl (class in dolfin.cpp.fem) ErrorControl_default_parameters() (in module dolfin.cpp.fem) errornorm() (in module dolfin.fem.norms) ESDIRK3 (class in dolfin.multistage.multistagescheme) ESDIRK4 (class in dolfin.multistage.multistagescheme) estimate_error() (dolfin.cpp.fem.ErrorControl method) eval() (dolfin.cpp.fem.BasisFunction method) (dolfin.cpp.function.Expression method) (dolfin.cpp.function.Function method) (dolfin.cpp.function.GenericFunction method) (dolfin.cpp.function.Lagrange method) (dolfin.cpp.function.Legendre static method) eval_cell() (dolfin.cpp.function.Expression method) (dolfin.cpp.function.GenericFunction method) eval_derivatives() (dolfin.cpp.fem.BasisFunction method) evaluate_basis() (dolfin.cpp.fem.FiniteElement method) evaluate_basis_all() (dolfin.cpp.fem.FiniteElement method) evaluate_basis_derivatives() (dolfin.cpp.fem.FiniteElement method) evaluate_basis_derivatives_all() (dolfin.cpp.fem.FiniteElement method) evaluate_dof() (dolfin.cpp.fem.FiniteElement method) evaluate_dofs() (dolfin.cpp.fem.FiniteElement method) evaluate_goal() (dolfin.cpp.fem.GenericAdaptiveVariationalSolver method) Event (class in dolfin.cpp.common) exists() (dolfin.cpp.io.File static method) (dolfin.cpp.io.HDF5Attribute method) (dolfin.cpp.mesh.MeshData method) ExplicitEuler (in module dolfin.multistage.multistagescheme) ExplicitMidPoint (class in dolfin.multistage.multistagescheme) Expression (in Mixed Poisson demo) Expression (class in dolfin.cpp.function) (class in dolfin.functions.expression) expression_to_code_fragments() (in module dolfin.compilemodules.compilemodule) extend_cut_cell_integration (dolfin.cpp.fem.MultiMeshAssembler attribute) exterior() (dolfin.cpp.mesh.Facet method) exterior_facet_domains() (dolfin.cpp.fem.Form method) extract_bcs() (dolfin.cpp.fem.GenericAdaptiveVariationalSolver method) extract_mesh_data() (dolfin.cpp.mesh.LocalMeshData method) extract_sub_dofmap() (dolfin.cpp.fem.GenericDofMap method) extract_sub_element() (dolfin.cpp.fem.FiniteElement method) extract_sub_space() (dolfin.cpp.function.FunctionSpace method) (dolfin.functions.functionspace.FunctionSpace method) extract_tested_expressions() (in module dolfin.multistage.factorize) extrapolate() (dolfin.cpp.fem.Extrapolation static method) (dolfin.cpp.function.Function method) Extrapolation (class in dolfin.cpp.fem) Extrapolation_extrapolate() (in module dolfin.cpp.fem)

F

F() (dolfin.cpp.la.NonlinearProblem method) (dolfin.cpp.la.OptimisationProblem method) f() (dolfin.cpp.la.OptimisationProblem method) Face (class in dolfin.cpp.mesh) FaceFunction (class in dolfin.cpp.mesh) FaceFunctionBool (class in dolfin.cpp.mesh) FaceFunctionDouble (class in dolfin.cpp.mesh) FaceFunctionInt (class in dolfin.cpp.mesh) FaceFunctionSizet (class in dolfin.cpp.mesh) faces (class in dolfin.cpp.mesh) Facet (class in dolfin.cpp.mesh) facet_area() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method) facet_index() (dolfin.cpp.mesh.FacetCell method) facet_normals() (dolfin.cpp.mesh.MultiMesh method) facet_type() (dolfin.cpp.mesh.CellType method) FacetArea (class in dolfin.cpp.function) (class in dolfin.functions.specialfunctions) FacetCell (class in dolfin.cpp.mesh) FacetFunction (class in dolfin.cpp.mesh) FacetFunctionBool (class in dolfin.cpp.mesh) FacetFunctionDouble (class in dolfin.cpp.mesh) FacetFunctionInt (class in dolfin.cpp.mesh) FacetFunctionSizet (class in dolfin.cpp.mesh) FacetNormal() (in module dolfin.functions.specialfunctions) facets (class in dolfin.cpp.mesh) factorize() (dolfin.cpp.fem.LocalSolver method) factory() (dolfin.cpp.la.DefaultFactory static method) (dolfin.cpp.la.GenericTensor method) fem_solve() (in module dolfin.cpp.fem)

File (class in dolfin.cpp.io) File_create_parent_path() (in module dolfin.cpp.io) File_exists() (in module dolfin.cpp.io) fill() (dolfin.cpp.common.IndexSet method) finalize() (dolfin.cpp.common.SubSystemsManager static method) finalize_tensor (dolfin.cpp.fem.AssemblerBase attribute) find() (dolfin.cpp.common.IndexSet method) find_all_subdomains() (in module dolfin.mesh.boundarysubdomainfinder) find_keys_on_one_subdomain() (in module dolfin.mesh.boundarysubdomainfinder) find_new_cell_key() (in module dolfin.mesh.boundarysubdomainfinder) find_parameter() (dolfin.cpp.common.Parameters method) find_parameter_set() (dolfin.cpp.common.Parameters method) find_subdomain() (in module dolfin.mesh.boundarysubdomainfinder) finest() (dolfin.cpp.mesh.MeshHierarchy method) FiniteElement (class in dolfin.cpp.fem) flush() (dolfin.cpp.io.HDF5File method) Form (class in dolfin.cpp.fem) (class in dolfin.fem.form) form() (dolfin.cpp.la.NonlinearProblem method) (dolfin.cpp.la.OptimisationProblem method) ForwardEuler (in module dolfin.multistage.multistagescheme) Function (class in dolfin.cpp.function) (class in dolfin.functions.function) function_space() (dolfin.cpp.fem.DirichletBC method) (dolfin.cpp.fem.Form method) (dolfin.cpp.fem.MultiMeshForm method) (dolfin.cpp.function.Function method) (dolfin.cpp.function.MultiMeshFunction method) (dolfin.functions.function.Argument method) (dolfin.functions.multimeshfunction.MultiMeshFunction method) function_spaces() (dolfin.cpp.fem.Form method) FunctionAssigner (class in dolfin.cpp.function) FunctionAXPY (class in dolfin.cpp.function) FunctionSpace Brezzi-Douglas-Marini Discontinous Lagrange FunctionSpace (class in dolfin.cpp.function) (class in dolfin.functions.functionspace)

G

gather() (dolfin.cpp.common.MPI static method) (dolfin.cpp.la.EigenVector method) (dolfin.cpp.la.GenericVector method) (dolfin.cpp.la.PETScVector method) (dolfin.cpp.la.Vector method) gather_on_zero() (dolfin.cpp.la.GenericVector method) generate_error_control() (in module dolfin.fem.adaptivesolving) generate_error_control_forms() (in module dolfin.fem.adaptivesolving) GenericAdaptiveVariationalSolver (class in dolfin.cpp.fem) GenericAdaptiveVariationalSolver_default_parameters() (in module dolfin.cpp.fem) GenericBoundingBoxTree (class in dolfin.cpp.mesh) GenericBoundingBoxTree_create() (in module dolfin.cpp.mesh) GenericDofMap (class in dolfin.cpp.fem) GenericFile (class in dolfin.cpp.io) GenericFunction (class in dolfin.cpp.function) GenericLinearAlgebraFactory (class in dolfin.cpp.la) GenericLinearOperator (class in dolfin.cpp.la) GenericLinearSolver (class in dolfin.cpp.la) GenericLUSolver (class in dolfin.cpp.la) GenericMatrix (class in dolfin.cpp.la) GenericTensor (class in dolfin.cpp.la) GenericVector (class in dolfin.cpp.la) geometric_dimension (dolfin.cpp.common.ufc_cell attribute) (dolfin.cpp.fem.ufc_cell attribute) (dolfin.cpp.function.ufc_cell attribute) (dolfin.cpp.io.ufc_cell attribute) (dolfin.cpp.la.ufc_cell attribute) (dolfin.cpp.mesh.ufc_cell attribute) geometric_dimension() (dolfin.cpp.fem.FiniteElement method) (dolfin.cpp.function.Function method) (dolfin.cpp.mesh.SubDomain method) geometry (dolfin.cpp.mesh.LocalMeshData attribute) geometry() (dolfin.cpp.mesh.Mesh method) get() (dolfin.cpp.common.Parameters method) (dolfin.cpp.common.Table method) (dolfin.cpp.la.GenericMatrix method) get_allow_extrapolation() (dolfin.cpp.function.Function method) get_ambient_intensity() (dolfin.cpp.io.X3DOMParameters method) get_background_color() (dolfin.cpp.io.X3DOMParameters method) get_block() (dolfin.cpp.la.BlockMatrix method) (dolfin.cpp.la.BlockVector method) get_boundary_values() (dolfin.cpp.fem.DirichletBC method) get_cell_data() (dolfin.cpp.mesh.Cell method) get_cell_topology() (dolfin.cpp.mesh.Cell method) get_color_map() (dolfin.cpp.io.X3DOMParameters method) get_coordinate_dofs() (dolfin.cpp.mesh.Cell method) get_coordinates() (in module dolfin.cpp.fem) get_diagonal() (dolfin.cpp.la.GenericMatrix method) get_diffuse_color() (dolfin.cpp.io.X3DOMParameters method) get_eigenpair() (dolfin.cpp.la.SLEPcEigenSolver method) get_eigenvalue() (dolfin.cpp.la.SLEPcEigenSolver method) get_emissive_color() (dolfin.cpp.io.X3DOMParameters method) get_entity_index() (dolfin.cpp.mesh.MeshGeometry method)

get_iteration_number() (dolfin.cpp.la.SLEPcEigenSolver method) get_local() (dolfin.cpp.la.EigenVector method) (dolfin.cpp.la.GenericVector method) (dolfin.cpp.la.PETScVector method) (dolfin.cpp.la.Vector method) get_log_level() (in module dolfin.cpp.common) get_marker() (dolfin.cpp.mesh.MeshDomains method) get_matrix() (dolfin.cpp.la.TAOLinearBoundSolver method) get_menu_display() (dolfin.cpp.io.X3DOMParameters method) get_mpi_atomicity() (dolfin.cpp.io.HDF5File method) get_norm_type() (dolfin.cpp.la.PETScKrylovSolver method) get_number_converged() (dolfin.cpp.la.SLEPcEigenSolver method) get_operator() (dolfin.cpp.la.EigenKrylovSolver method) (dolfin.cpp.la.EigenLUSolver method) (dolfin.cpp.la.PETScLUSolver method) get_options_prefix() (dolfin.cpp.la.PETScKrylovSolver method) (dolfin.cpp.la.PETScLUSolver method) (dolfin.cpp.la.PETScMatrix method) (dolfin.cpp.la.PETScSNESSolver method) (dolfin.cpp.la.PETScVector method) (dolfin.cpp.la.SLEPcEigenSolver method) get_range() (dolfin.cpp.common.Parameters method) (dolfin.cpp.common.ParameterValue method) get_representation() (dolfin.cpp.io.X3DOMParameters method) get_scalar_value() (dolfin.cpp.la.Scalar method) get_shininess() (dolfin.cpp.io.X3DOMParameters method) get_specular_color() (dolfin.cpp.io.X3DOMParameters method) get_tensor_type() (in module dolfin.cpp.la) get_transparency() (dolfin.cpp.io.X3DOMParameters method) get_value() (dolfin.cpp.common.Table method) (dolfin.cpp.mesh.MeshValueCollectionBool method) (dolfin.cpp.mesh.MeshValueCollectionDouble method) (dolfin.cpp.mesh.MeshValueCollectionInt method) (dolfin.cpp.mesh.MeshValueCollectionSizet method) get_vector() (dolfin.cpp.la.TAOLinearBoundSolver method) get_vertex_coordinates() (dolfin.cpp.mesh.Cell method) get_viewport_size() (dolfin.cpp.io.X3DOMParameters method) get_x3d_stats() (dolfin.cpp.io.X3DOMParameters method) getrow() (dolfin.cpp.la.GenericMatrix method) ghost_offset() (dolfin.cpp.mesh.MeshTopology method) Ghosts_GHOSTED (dolfin.cpp.la.TensorLayout attribute) Ghosts_UNGHOSTED (dolfin.cpp.la.TensorLayout attribute) git_commit_hash() (in module dolfin.cpp.common) global_dimension() (dolfin.cpp.fem.GenericDofMap method) (dolfin.cpp.fem.MultiMeshDofMap method) global_index() (dolfin.cpp.mesh.MeshEntity method) global_indices() (dolfin.cpp.mesh.MeshTopology method) global_offset() (dolfin.cpp.common.MPI static method) GlobalParameters (class in dolfin.cpp.common) GlobalParameters_default_parameters() (in module dolfin.cpp.common) Graph (class in dolfin.cpp.mesh) GraphBuilder (class in dolfin.cpp.mesh) GraphBuilder_local_graph() (in module dolfin.cpp.mesh) GRL1 (class in dolfin.multistage.rushlarsenschemes) GRL2 (class in dolfin.multistage.rushlarsenschemes)

H

h() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method) h5_id() (dolfin.cpp.io.HDF5File method) has_cell() (dolfin.cpp.function.FunctionSpace method) has_child() (dolfin.cpp.fem.HierarchicalDirichletBC method) (dolfin.cpp.fem.HierarchicalErrorControl method) (dolfin.cpp.fem.HierarchicalForm method) (dolfin.cpp.fem.HierarchicalFunction method) (dolfin.cpp.fem.HierarchicalFunctionSpace method) (dolfin.cpp.fem.HierarchicalLinearVariationalProblem method) (dolfin.cpp.fem.HierarchicalMesh method) (dolfin.cpp.fem.HierarchicalNonlinearVariationalProblem method) (dolfin.cpp.function.HierarchicalFunction method) (dolfin.cpp.function.HierarchicalFunctionSpace method) (dolfin.cpp.function.HierarchicalMesh method) (dolfin.cpp.io.HierarchicalFunction method) (dolfin.cpp.io.HierarchicalFunctionSpace method) (dolfin.cpp.io.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalFunction method) (dolfin.cpp.mesh.HierarchicalFunctionSpace method) (dolfin.cpp.mesh.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalMeshFunctionBool method) (dolfin.cpp.mesh.HierarchicalMeshFunctionDouble method) (dolfin.cpp.mesh.HierarchicalMeshFunctionInt method) (dolfin.cpp.mesh.HierarchicalMeshFunctionSizet method) (dolfin.cpp.mesh.HierarchicalMeshFunctionUInt method) has_cholmod() (in module dolfin.cpp.common) has_dataset() (dolfin.cpp.io.HDF5File method) has_element() (dolfin.cpp.function.FunctionSpace method) has_hdf5() (in module dolfin.cpp.common) has_index() (dolfin.cpp.common.IndexSet method) has_jacobian() (dolfin.cpp.fem.NonlinearVariationalProblem method) has_key() (dolfin.cpp.common.Parameters method) has_krylov_solver_method() (in module dolfin.cpp.la) has_krylov_solver_preconditioner() (in module dolfin.cpp.la) has_lower_bound() (dolfin.cpp.fem.NonlinearVariationalProblem method) has_lu_solver_method() (in module dolfin.cpp.la) has_mpi() (in module dolfin.cpp.common) has_openmp() (in module dolfin.cpp.common) has_parameter() (dolfin.cpp.common.Parameters method) has_parameter_set() (dolfin.cpp.common.Parameters method) has_parent() (dolfin.cpp.fem.HierarchicalDirichletBC method) (dolfin.cpp.fem.HierarchicalErrorControl method) (dolfin.cpp.fem.HierarchicalForm method) (dolfin.cpp.fem.HierarchicalFunction method) (dolfin.cpp.fem.HierarchicalFunctionSpace method) (dolfin.cpp.fem.HierarchicalLinearVariationalProblem method) (dolfin.cpp.fem.HierarchicalMesh method) (dolfin.cpp.fem.HierarchicalNonlinearVariationalProblem method) (dolfin.cpp.function.HierarchicalFunction method) (dolfin.cpp.function.HierarchicalFunctionSpace method) (dolfin.cpp.function.HierarchicalMesh method) (dolfin.cpp.io.HierarchicalFunction method) (dolfin.cpp.io.HierarchicalFunctionSpace method) (dolfin.cpp.io.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalFunction method) (dolfin.cpp.mesh.HierarchicalFunctionSpace method) (dolfin.cpp.mesh.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalMeshFunctionBool method) (dolfin.cpp.mesh.HierarchicalMeshFunctionDouble method) (dolfin.cpp.mesh.HierarchicalMeshFunctionInt method) (dolfin.cpp.mesh.HierarchicalMeshFunctionSizet method) (dolfin.cpp.mesh.HierarchicalMeshFunctionUInt method) has_parmetis() (in module dolfin.cpp.common) has_petsc() (in module dolfin.cpp.common) has_scotch() (in module dolfin.cpp.common) has_slepc() (in module dolfin.cpp.common) has_type() (in module dolfin.cpp.la) has_umfpack() (in module dolfin.cpp.common)

has_upper_bound() (dolfin.cpp.fem.NonlinearVariationalProblem method) has_vtk() (in module dolfin.cpp.common) has_zlib() (in module dolfin.cpp.common) hash() (dolfin.cpp.fem.FiniteElement method) (dolfin.cpp.mesh.Mesh method) (dolfin.cpp.mesh.MeshConnectivity method) (dolfin.cpp.mesh.MeshGeometry method) (dolfin.cpp.mesh.MeshTopology method) have_global_indices() (dolfin.cpp.mesh.MeshTopology method) have_shared_entities() (dolfin.cpp.mesh.MeshTopology method) HDF5Attribute (class in dolfin.cpp.io) HDF5File (class in dolfin.cpp.io) hexahedron (dolfin.cpp.mesh.CellType attribute) HierarchicalDirichletBC (class in dolfin.cpp.fem) HierarchicalErrorControl (class in dolfin.cpp.fem) HierarchicalForm (class in dolfin.cpp.fem) HierarchicalFunction (class in dolfin.cpp.fem) (class in dolfin.cpp.function) (class in dolfin.cpp.io) (class in dolfin.cpp.mesh) HierarchicalFunctionSpace (class in dolfin.cpp.fem) (class in dolfin.cpp.function) (class in dolfin.cpp.io) (class in dolfin.cpp.mesh) HierarchicalLinearVariationalProblem (class in dolfin.cpp.fem) HierarchicalMesh (class in dolfin.cpp.fem) (class in dolfin.cpp.function) (class in dolfin.cpp.io) (class in dolfin.cpp.mesh) HierarchicalMeshFunctionBool (class in dolfin.cpp.mesh) HierarchicalMeshFunctionDouble (class in dolfin.cpp.mesh) HierarchicalMeshFunctionInt (class in dolfin.cpp.mesh) HierarchicalMeshFunctionSizet (class in dolfin.cpp.mesh) HierarchicalMeshFunctionUInt (class in dolfin.cpp.mesh) HierarchicalNonlinearVariationalProblem (class in dolfin.cpp.fem) hmax() (dolfin.cpp.mesh.Mesh method) hmin() (dolfin.cpp.mesh.Mesh method) homogenize() (dolfin.cpp.fem.DirichletBC method) html() (dolfin.cpp.io.X3DOM static method)

I

id() (dolfin.cpp.common.Variable method) ident() (dolfin.cpp.la.GenericMatrix method) ident_local() (dolfin.cpp.la.GenericMatrix method) ident_zeros() (dolfin.cpp.la.GenericMatrix method) implicit() (dolfin.cpp.fem.MultiStageScheme method) ImplicitEuler (in module dolfin.multistage.multistagescheme) in_nullspace() (in module dolfin.cpp.la) incident() (dolfin.cpp.mesh.MeshEntity method) increase_order() (in module dolfin.fem.formmanipulations) index (dolfin.cpp.common.ufc_cell attribute) (dolfin.cpp.fem.ufc_cell attribute) (dolfin.cpp.function.ufc_cell attribute) (dolfin.cpp.io.ufc_cell attribute) (dolfin.cpp.la.ufc_cell attribute) (dolfin.cpp.mesh.ufc_cell attribute) index() (dolfin.cpp.mesh.MeshEntity method) index_map() (dolfin.cpp.fem.GenericDofMap method) (dolfin.cpp.fem.MultiMeshDofMap method) (dolfin.cpp.la.TensorLayout method) index_owner() (dolfin.cpp.common.MPI static method) IndexMap (class in dolfin.cpp.la) IndexSet (class in dolfin.cpp.common) info() (in module dolfin.cpp.common) info_stream() (in module dolfin.cpp.common) info_underline() (in module dolfin.cpp.common) init() (dolfin.cpp.la.EigenVector method) (dolfin.cpp.la.GenericTensor method) (dolfin.cpp.la.GenericVector method) (dolfin.cpp.la.IndexMap method) (dolfin.cpp.la.PETScSNESSolver method) (dolfin.cpp.la.PETScTAOSolver method) (dolfin.cpp.la.PETScVector method) (dolfin.cpp.la.SparsityPattern method) (dolfin.cpp.la.TensorLayout method) (dolfin.cpp.la.Vector method) (dolfin.cpp.mesh.Mesh method) (dolfin.cpp.mesh.MeshConnectivity method) (dolfin.cpp.mesh.MeshDomains method) (dolfin.cpp.mesh.MeshEntity method) (dolfin.cpp.mesh.MeshFunctionBool method) (dolfin.cpp.mesh.MeshFunctionDouble method) (dolfin.cpp.mesh.MeshFunctionInt method) (dolfin.cpp.mesh.MeshFunctionSizet method) (dolfin.cpp.mesh.MeshGeometry method) (dolfin.cpp.mesh.MeshTopology method) (dolfin.cpp.mesh.MeshValueCollectionBool method) (dolfin.cpp.mesh.MeshValueCollectionDouble method) (dolfin.cpp.mesh.MeshValueCollectionInt method) (dolfin.cpp.mesh.MeshValueCollectionSizet method) (in module dolfin.cpp.common) init_cell_orientations() (dolfin.cpp.mesh.Mesh method) init_cells() (dolfin.cpp.mesh.MeshEditor method) init_cells_global() (dolfin.cpp.mesh.MeshEditor method) init_entities() (dolfin.cpp.mesh.MeshEditor method) (dolfin.cpp.mesh.MeshGeometry method) init_ghost() (dolfin.cpp.mesh.MeshTopology method) init_global() (dolfin.cpp.mesh.Mesh method) init_global_indices() (dolfin.cpp.mesh.MeshTopology method) init_global_tensor() (dolfin.cpp.fem.AssemblerBase method) init_layout() (dolfin.cpp.la.LinearOperator method) (dolfin.cpp.la.PETScLinearOperator method) init_mpi() (dolfin.cpp.common.SubSystemsManager static method) init_parent_edge_indices() (in module dolfin.mesh.ale) init_petsc() (dolfin.cpp.common.SubSystemsManager static method) init_vector() (dolfin.cpp.la.GenericMatrix method) (dolfin.cpp.la.PETScBaseMatrix method) init_vertices() (dolfin.cpp.mesh.MeshEditor method) init_vertices_global() (dolfin.cpp.mesh.MeshEditor method) initialize_data() (dolfin.fem.errorcontrolgenerator.DOLFINErrorControlGenerator method) inner() (dolfin.cpp.la.BlockVector method) (dolfin.cpp.la.GenericVector method) inradius() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method)

insert() (dolfin.cpp.common.IndexSet method) insert_full_rows_local() (dolfin.cpp.la.SparsityPattern method) insert_global() (dolfin.cpp.la.SparsityPattern method) insert_local() (dolfin.cpp.la.SparsityPattern method) inside() (dolfin.cpp.mesh.SubDomain method) (dolfin.fem.bcs.AutoSubDomain method) instance() (dolfin.cpp.la.EigenFactory static method) (dolfin.cpp.la.PETScFactory static method) IntArray (class in dolfin.cpp.common) interactive() (dolfin.cpp.io.VTKPlotter method) (in module dolfin.cpp.io) interior_facet_domains() (dolfin.cpp.fem.Form method) interpolate() (dolfin.cpp.function.Function method) (dolfin.cpp.function.FunctionSpace method) (dolfin.cpp.function.LagrangeInterpolator static method) (in module dolfin.fem.interpolation) interpolate_vertex_values() (dolfin.cpp.fem.FiniteElement method) interpolating functions (in Cahn-Hilliard demo) intersect() (in module dolfin.cpp.mesh) intersected_cells() (dolfin.cpp.mesh.MeshPointIntersection method) interval (dolfin.cpp.mesh.CellType attribute) IntervalMesh (class in dolfin.cpp.mesh) IntParameter (class in dolfin.cpp.common) ipow() (in module dolfin.cpp.function) is_broadcaster() (dolfin.cpp.common.MPI static method) is_compatible() (dolfin.cpp.io.VTKPlotter method) is_empty() (dolfin.cpp.mesh.MeshDomains method) is_ghost() (dolfin.cpp.mesh.MeshEntity method) is_ghosted() (dolfin.cpp.la.TensorLayout method) is_linear() (dolfin.cpp.fem.Equation method) is_orthogonal() (dolfin.cpp.la.VectorSpaceBasis method) is_orthonormal() (dolfin.cpp.la.VectorSpaceBasis method) is_receiver() (dolfin.cpp.common.MPI static method) is_set() (dolfin.cpp.common.ParameterValue method) is_shared() (dolfin.cpp.mesh.MeshEntity method) is_symmetric() (dolfin.cpp.la.GenericMatrix method) is_view() (dolfin.cpp.fem.GenericDofMap method) items() (dolfin.cpp.common.Parameters method) (dolfin.cpp.io.HDF5Attribute method) iteration() (dolfin.cpp.la.NewtonSolver method) iterdata() (dolfin.cpp.common.Parameters method) iteritems() (dolfin.cpp.common.Parameters method) iterkeys() (dolfin.cpp.common.Parameters method) itervalues() (dolfin.cpp.common.Parameters method)

J

J() (dolfin.cpp.la.NonlinearProblem method) (dolfin.cpp.la.OptimisationProblem method) jacobian_form() (dolfin.cpp.fem.NonlinearVariationalProblem method)

jacobian_index() (dolfin.cpp.fem.MultiStageScheme method) jit() (in module dolfin.compilemodules.jit)

K

keep_diagonal (dolfin.cpp.fem.AssemblerBase attribute) key() (dolfin.cpp.common.ParameterValue method) (dolfin.cpp.io.VTKPlotter method) key_pressed() (dolfin.cpp.io.VTKPlotter method) keys() (dolfin.cpp.common.Parameters method) (dolfin.cpp.io.HDF5Attribute method) krylov_solver_methods() (dolfin.cpp.la.GenericLinearAlgebraFactory method) (in module dolfin.cpp.la)

krylov_solver_preconditioners() (dolfin.cpp.la.GenericLinearAlgebraFactory method) (in module dolfin.cpp.la) krylov_solvers() (dolfin.cpp.la.TAOLinearBoundSolver static method) KrylovSolver (class in dolfin.cpp.la) KrylovSolver_default_parameters() (in module dolfin.cpp.la) ksp() (dolfin.cpp.la.PETScKrylovSolver method) (dolfin.cpp.la.PETScLUSolver method)

L

la_index_dtype() (in module dolfin.cpp.la) la_solve() (in module dolfin.cpp.la) label() (dolfin.cpp.common.Variable method) Lagrange (class in dolfin.cpp.function) LagrangeInterpolator (class in dolfin.cpp.function) LagrangeInterpolator_interpolate() (in module dolfin.cpp.function) last_stage() (dolfin.multistage.multistagescheme.MultiStageScheme method) (dolfin.multistage.rushlarsenschemes.MultiStageScheme method) leaf_node() (dolfin.cpp.fem.HierarchicalDirichletBC method) (dolfin.cpp.fem.HierarchicalErrorControl method) (dolfin.cpp.fem.HierarchicalForm method) (dolfin.cpp.fem.HierarchicalLinearVariationalProblem method) (dolfin.cpp.fem.HierarchicalNonlinearVariationalProblem method) (dolfin.cpp.function.Function method) (dolfin.cpp.function.FunctionSpace method) (dolfin.cpp.mesh.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalMeshFunctionBool method) (dolfin.cpp.mesh.HierarchicalMeshFunctionDouble method) (dolfin.cpp.mesh.HierarchicalMeshFunctionInt method) (dolfin.cpp.mesh.HierarchicalMeshFunctionSizet method) Legendre (class in dolfin.cpp.function) Legendre_d2dx() (in module dolfin.cpp.function) Legendre_ddx() (in module dolfin.cpp.function) Legendre_eval() (in module dolfin.cpp.function) length() (dolfin.cpp.mesh.Edge method) lhs() (dolfin.cpp.fem.Equation method) linear_algebra_backends() (in module dolfin.cpp.la) linear_form() (dolfin.cpp.fem.LinearVariationalProblem method) linear_solver() (dolfin.cpp.la.NewtonSolver method) linear_solver_methods() (in module dolfin.cpp.la) LinearAlgebraObject (class in dolfin.cpp.la) LinearOperator (class in dolfin.cpp.la) LinearSolver (class in dolfin.cpp.la) LinearSolver_default_parameters() (in module dolfin.cpp.la) LinearVariationalProblem (class in dolfin.cpp.fem) (class in dolfin.fem.solving) LinearVariationalSolver (class in dolfin.cpp.fem) (class in dolfin.fem.solving) LinearVariationalSolver_default_parameters() (in module dolfin.cpp.fem) list_attributes() (dolfin.cpp.io.HDF5Attribute method)

list_krylov_solver_methods() (in module dolfin.cpp.la) list_krylov_solver_preconditioners() (in module dolfin.cpp.la) list_linear_algebra_backends() (in module dolfin.cpp.la) list_linear_solver_methods() (in module dolfin.cpp.la) list_lu_solver_methods() (in module dolfin.cpp.la) list_timings() (in module dolfin.cpp.common) local_facet (dolfin.cpp.common.ufc_cell attribute) (dolfin.cpp.fem.ufc_cell attribute) (dolfin.cpp.function.ufc_cell attribute) (dolfin.cpp.io.ufc_cell attribute) (dolfin.cpp.la.ufc_cell attribute) (dolfin.cpp.mesh.ufc_cell attribute) local_graph() (dolfin.cpp.mesh.GraphBuilder static method) local_range() (dolfin.cpp.common.MPI static method) (dolfin.cpp.la.GenericTensor method) (dolfin.cpp.la.GenericVector method) (dolfin.cpp.la.IndexMap method) (dolfin.cpp.la.PETScBaseMatrix method) (dolfin.cpp.la.SparsityPattern method) (dolfin.cpp.la.TensorLayout method) local_size() (dolfin.cpp.la.GenericVector method) local_to_global() (dolfin.cpp.la.IndexMap method) local_to_global_index() (dolfin.cpp.fem.GenericDofMap method) local_to_global_unowned() (dolfin.cpp.fem.GenericDofMap method) (dolfin.cpp.la.IndexMap method) LocalAssembler (class in dolfin.cpp.fem) LocalAssembler_assemble() (in module dolfin.cpp.fem) LocalAssembler_assemble_cell() (in module dolfin.cpp.fem) LocalAssembler_assemble_exterior_facet() (in module dolfin.cpp.fem) LocalAssembler_assemble_interior_facet() (in module dolfin.cpp.fem) LocalMeshData (class in dolfin.cpp.mesh) LocalSolver (class in dolfin.cpp.fem) (class in dolfin.fem.solving) log() (in module dolfin.cpp.common) lower_bound() (dolfin.cpp.fem.NonlinearVariationalProblem method) lu_solver_methods() (dolfin.cpp.la.GenericLinearAlgebraFactory method) (in module dolfin.cpp.la) LUSolver (class in dolfin.cpp.la) LUSolver_default_parameters() (in module dolfin.cpp.la)

M

main() (in module dolfin.mesh.boundarysubdomainfinder) map() (dolfin.cpp.mesh.SubDomain method) map_tolerance (dolfin.cpp.mesh.SubDomain attribute) MapSize_ALL (dolfin.cpp.la.IndexMap attribute) MapSize_GLOBAL (dolfin.cpp.la.IndexMap attribute) MapSize_OWNED (dolfin.cpp.la.IndexMap attribute) MapSize_UNOWNED (dolfin.cpp.la.IndexMap attribute) mark() (dolfin.cpp.mesh.SubDomain method) (in module dolfin.cpp.fem) mark_cells() (dolfin.cpp.mesh.SubDomain method) mark_facets() (dolfin.cpp.mesh.SubDomain method) markers() (dolfin.cpp.fem.DirichletBC method) (dolfin.cpp.mesh.MeshDomains method) masters_slaves() (dolfin.cpp.mesh.PeriodicBoundaryComputation static method) mat() (dolfin.cpp.la.EigenMatrix method) (dolfin.cpp.la.PETScBaseMatrix method) Matrix (class in dolfin.cpp.la) max() (dolfin.cpp.common.MPI static method) (dolfin.cpp.la.BlockVector method) (dolfin.cpp.la.GenericVector method) max_cell_dimension() (dolfin.cpp.fem.GenericDofMap method) max_dim() (dolfin.cpp.mesh.MeshDomains method) max_element_dofs() (dolfin.cpp.fem.GenericDofMap method) maxcount() (dolfin.cpp.common.Event method) MaxFacetEdgeLength() (in module dolfin.functions.specialfunctions) memory_usage() (in module dolfin.common.memory) Mesh (class in dolfin.cpp.mesh) mesh() (dolfin.cpp.fem.Form method) (dolfin.cpp.function.FunctionSpace method) (dolfin.cpp.mesh.MeshEntity method) (dolfin.cpp.mesh.MeshFunctionBool method) (dolfin.cpp.mesh.MeshFunctionDouble method) (dolfin.cpp.mesh.MeshFunctionInt method) (dolfin.cpp.mesh.MeshFunctionSizet method) (dolfin.cpp.mesh.MeshValueCollectionBool method) (dolfin.cpp.mesh.MeshValueCollectionDouble method) (dolfin.cpp.mesh.MeshValueCollectionInt method) (dolfin.cpp.mesh.MeshValueCollectionSizet method) mesh2svg() (in module dolfin.mesh.svgtools) mesh_id() (dolfin.cpp.mesh.MeshEntity method) mesh_identifier (dolfin.cpp.common.ufc_cell attribute) (dolfin.cpp.fem.ufc_cell attribute) (dolfin.cpp.function.ufc_cell attribute) (dolfin.cpp.io.ufc_cell attribute) (dolfin.cpp.la.ufc_cell attribute) (dolfin.cpp.mesh.ufc_cell attribute) mesh_times() (dolfin.cpp.fem.TimeSeries method) MeshColoring (class in dolfin.cpp.mesh) MeshColoring_cell_colors() (in module dolfin.cpp.mesh) MeshColoring_color() (in module dolfin.cpp.mesh) MeshColoring_color_cells() (in module dolfin.cpp.mesh) MeshColoring_compute_colors() (in module dolfin.cpp.mesh) MeshColoring_type_to_dim() (in module dolfin.cpp.mesh) MeshConnectivity (class in dolfin.cpp.mesh) MeshCoordinates (class in dolfin.cpp.function) (class in dolfin.functions.specialfunctions) MeshData (class in dolfin.cpp.mesh) MeshDisplacement (class in dolfin.cpp.function) MeshDomains (class in dolfin.cpp.mesh) MeshEditor (class in dolfin.cpp.mesh) MeshEntity (class in dolfin.cpp.mesh) MeshFunction (class in dolfin.cpp.mesh) MeshFunctionBool (class in dolfin.cpp.mesh) MeshFunctionDouble (class in dolfin.cpp.mesh) MeshFunctionInt (class in dolfin.cpp.mesh) MeshFunctionSizet (class in dolfin.cpp.mesh) MeshGeometry (class in dolfin.cpp.mesh) MeshHierarchy (class in dolfin.cpp.mesh) MeshPartitioning (class in dolfin.cpp.mesh) MeshPartitioning_build_distributed_mesh() (in module dolfin.cpp.mesh) MeshPointIntersection (class in dolfin.cpp.mesh) MeshQuality (class in dolfin.cpp.mesh) MeshQuality_dihedral_angles() (in module dolfin.cpp.mesh) MeshQuality_dihedral_angles_histogram_data() (in module dolfin.cpp.mesh) MeshQuality_dihedral_angles_matplotlib_histogram() (in module dolfin.cpp.mesh) MeshQuality_dihedral_angles_min_max() (in module dolfin.cpp.mesh) MeshQuality_radius_ratio_histogram_data() (in module dolfin.cpp.mesh) MeshQuality_radius_ratio_matplotlib_histogram() (in module dolfin.cpp.mesh)

MeshQuality_radius_ratio_min_max() (in module dolfin.cpp.mesh) MeshQuality_radius_ratios() (in module dolfin.cpp.mesh) MeshRenumbering (class in dolfin.cpp.mesh) MeshRenumbering_renumber_by_color() (in module dolfin.cpp.mesh) MeshTopology (class in dolfin.cpp.mesh) MeshTransformation (class in dolfin.cpp.mesh) MeshValueCollection (class in dolfin.cpp.mesh) MeshValueCollectionBool (class in dolfin.cpp.mesh) MeshValueCollectionDouble (class in dolfin.cpp.mesh) MeshValueCollectionInt (class in dolfin.cpp.mesh) MeshValueCollectionSizet (class in dolfin.cpp.mesh) method() (dolfin.cpp.fem.DirichletBC method) methods() (dolfin.cpp.la.EigenKrylovSolver static method) (dolfin.cpp.la.EigenLUSolver static method) (dolfin.cpp.la.PETScKrylovSolver static method) (dolfin.cpp.la.PETScLUSolver static method) (dolfin.cpp.la.PETScSNESSolver static method) (dolfin.cpp.la.PETScTAOSolver static method) (dolfin.cpp.la.TAOLinearBoundSolver static method) midpoint() (dolfin.cpp.mesh.MeshEntity method) min() (dolfin.cpp.common.MPI static method) (dolfin.cpp.la.BlockVector method) (dolfin.cpp.la.GenericVector method) MinFacetEdgeLength() (in module dolfin.functions.specialfunctions) Modifiers_ALT (dolfin.cpp.io.VTKPlotter attribute) Modifiers_CONTROL (dolfin.cpp.io.VTKPlotter attribute) Modifiers_SHIFT (dolfin.cpp.io.VTKPlotter attribute) monitor() (dolfin.cpp.la.PETScKrylovSolver method) monitor_memory_usage() (in module dolfin.cpp.common) move() (dolfin.cpp.function.ALE static method) MPI (class in dolfin.cpp.common) MPI_AVG() (dolfin.cpp.common.MPI static method) MPI_avg() (in module dolfin.cpp.common) MPI_barrier() (in module dolfin.cpp.common) MPI_Comm (class in dolfin.cpp.common) mpi_comm() (dolfin.cpp.la.CoordinateMatrix method) (dolfin.cpp.la.IndexMap method) (dolfin.cpp.la.LinearAlgebraObject method) (dolfin.cpp.la.LinearOperator method) (dolfin.cpp.la.PETScBaseMatrix method) (dolfin.cpp.la.PETScKrylovSolver method) (dolfin.cpp.la.PETScLUSolver method) (dolfin.cpp.la.PETScLinearOperator method) (dolfin.cpp.la.PETScMatrix method) (dolfin.cpp.la.PETScSNESSolver method) (dolfin.cpp.la.SparsityPattern method) (dolfin.cpp.la.TensorLayout method) (dolfin.cpp.mesh.LocalMeshData method) (dolfin.cpp.mesh.Mesh method) MPI_compute_local_range() (in module dolfin.cpp.common) mpi_finalized() (dolfin.cpp.common.SubSystemsManager static method) MPI_gather() (in module dolfin.cpp.common) MPI_global_offset() (in module dolfin.cpp.common) MPI_index_owner() (in module dolfin.cpp.common) mpi_initialized() (dolfin.cpp.common.SubSystemsManager static method) MPI_is_broadcaster() (in module dolfin.cpp.common) MPI_is_receiver() (in module dolfin.cpp.common) MPI_local_range() (in module dolfin.cpp.common) MPI_max() (in module dolfin.cpp.common) MPI_min() (in module dolfin.cpp.common) MPI_MPI_AVG() (in module dolfin.cpp.common) MPI_rank() (in module dolfin.cpp.common) MPI_size() (in module dolfin.cpp.common) MPI_sum() (in module dolfin.cpp.common) MPIInfo (class in dolfin.cpp.common) mult() (dolfin.cpp.la.BlockMatrix method) (dolfin.cpp.la.GenericLinearOperator method) (dolfin.cpp.la.LinearOperator method) (dolfin.cpp.la.PETScLinearOperator method) MultiMesh (class in dolfin.cpp.mesh) multimesh() (dolfin.cpp.fem.MultiMeshForm method) (dolfin.cpp.function.MultiMeshFunctionSpace method) MultiMeshAssembler (class in dolfin.cpp.fem) MultiMeshDirichletBC (class in dolfin.cpp.fem) MultiMeshDofMap (class in dolfin.cpp.fem) MultiMeshForm (class in dolfin.cpp.fem) MultiMeshFunction (class in dolfin.cpp.function) (class in dolfin.functions.multimeshfunction) MultiMeshFunctionSpace (class in dolfin.cpp.function) MultiMeshFunctionSpace() (in module dolfin.functions.functionspace) MultiMeshSubSpace (class in dolfin.cpp.function) MultiStageScheme (class in dolfin.cpp.fem) (class in dolfin.multistage.multistagescheme) (class in dolfin.multistage.rushlarsenschemes)

N

name() (dolfin.cpp.common.Parameters method) (dolfin.cpp.common.Variable method) (dolfin.cpp.io.GenericFile method) near() (in module dolfin.cpp.function) neighbours() (dolfin.cpp.fem.GenericDofMap method) new_instancemethod() (in module dolfin.cpp.common) (in module dolfin.cpp.fem) (in module dolfin.cpp.function) (in module dolfin.cpp.io) (in module dolfin.cpp.la) (in module dolfin.cpp.mesh) Newton solver (in Cahn-Hilliard demo) NewtonSolver (class in dolfin.cpp.la) NewtonSolver_default_parameters() (in module dolfin.cpp.la) next() (dolfin.cpp.mesh.cells method) (dolfin.cpp.mesh.SubsetIterator method) (dolfin.cpp.mesh.edges method) (dolfin.cpp.mesh.entities method) (dolfin.cpp.mesh.faces method) (dolfin.cpp.mesh.facets method) (dolfin.cpp.mesh.vertices method) nnz() (dolfin.cpp.la.GenericMatrix method) NonlinearProblem (in Cahn-Hilliard demo) NonlinearProblem (class in dolfin.cpp.la) NonlinearVariationalProblem (class in dolfin.cpp.fem) (class in dolfin.fem.solving) NonlinearVariationalSolver (class in dolfin.cpp.fem) (class in dolfin.fem.solving) NonlinearVariationalSolver_default_parameters() (in module dolfin.cpp.fem) norm() (dolfin.cpp.la.BlockVector method) (dolfin.cpp.la.CoordinateMatrix method) (dolfin.cpp.la.GenericMatrix method) (dolfin.cpp.la.GenericVector method) (dolfin.cpp.mesh.Point method) (in module dolfin.fem.norms) norm_type_default_norm (dolfin.cpp.la.PETScKrylovSolver attribute) norm_type_natural (dolfin.cpp.la.PETScKrylovSolver attribute) norm_type_none (dolfin.cpp.la.PETScKrylovSolver attribute) norm_type_preconditioned (dolfin.cpp.la.PETScKrylovSolver attribute) norm_type_unpreconditioned (dolfin.cpp.la.PETScKrylovSolver attribute) normal() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method) (dolfin.cpp.mesh.Face method) (dolfin.cpp.mesh.Facet method) normalize() (in module dolfin.cpp.la) not_working_in_parallel() (in module dolfin.cpp.common) num_assigning_functions() (dolfin.cpp.function.FunctionAssigner method)

num_cells() (dolfin.cpp.mesh.Mesh method) num_coefficients() (dolfin.cpp.fem.Form method) num_edges() (dolfin.cpp.mesh.Mesh method) num_element_dofs() (dolfin.cpp.fem.GenericDofMap method) num_entities() (dolfin.cpp.mesh.CellType method) (dolfin.cpp.mesh.Mesh method) (dolfin.cpp.mesh.MeshEntity method) num_entity_coordinates() (dolfin.cpp.mesh.MeshGeometry method) num_entity_dofs() (dolfin.cpp.fem.GenericDofMap method) num_faces() (dolfin.cpp.mesh.Mesh method) num_facet_dofs() (dolfin.cpp.fem.GenericDofMap method) num_facets() (dolfin.cpp.mesh.Mesh method) num_global_entities() (dolfin.cpp.mesh.MeshEntity method) num_jacobian_computations() (dolfin.cpp.fem.PointIntegralSolver method) num_local_nonzeros() (dolfin.cpp.la.SparsityPattern method) num_marked() (dolfin.cpp.mesh.MeshDomains method) num_nonzeros() (dolfin.cpp.la.SparsityPattern method) num_nonzeros_diagonal() (dolfin.cpp.la.SparsityPattern method) num_nonzeros_off_diagonal() (dolfin.cpp.la.SparsityPattern method) num_parts() (dolfin.cpp.fem.MultiMeshDofMap method) (dolfin.cpp.fem.MultiMeshForm method) (dolfin.cpp.function.MultiMeshFunctionSpace method) (dolfin.cpp.mesh.MultiMesh method) num_points() (dolfin.cpp.mesh.MeshGeometry method) num_receiving_functions() (dolfin.cpp.function.FunctionAssigner method) num_sub_elements() (dolfin.cpp.fem.FiniteElement method) num_sub_spaces() (dolfin.functions.functionspace.FunctionSpace method) num_vertices() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method) (dolfin.cpp.mesh.Mesh method) (dolfin.cpp.mesh.MeshGeometry method)

O

off_process_owner() (dolfin.cpp.fem.GenericDofMap method) (dolfin.cpp.fem.MultiMeshDofMap method) (dolfin.cpp.la.IndexMap method) old_init() (in module dolfin.cpp.common) open() (dolfin.cpp.mesh.DynamicMeshEditor method) (dolfin.cpp.mesh.MeshEditor method) OpenMpAssembler (class in dolfin.cpp.fem) OptimisationProblem (class in dolfin.cpp.la) option_string() (dolfin.cpp.common.Parameters method) order() (dolfin.cpp.fem.MultiStageScheme method) (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method) (dolfin.cpp.mesh.Mesh method) ordered() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method) (dolfin.cpp.mesh.Mesh method)

orientation() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method) original_coefficient_position() (dolfin.cpp.fem.Form method) orthogonalize() (dolfin.cpp.la.VectorSpaceBasis method) orthonormalize() (dolfin.cpp.la.VectorSpaceBasis method) owner() (dolfin.cpp.mesh.MeshEntity method) ownership_range() (dolfin.cpp.fem.GenericDofMap method) (dolfin.cpp.fem.MultiMeshDofMap method) owns_index() (dolfin.cpp.la.GenericVector method)

P

p_refine() (in module dolfin.cpp.mesh) pairs() (dolfin.cpp.function.FunctionAXPY method) parameter_type() (dolfin.cpp.la.GenericLinearSolver method) Parameters (class in dolfin.cpp.common) parameters (dolfin.cpp.common.Variable attribute) (dolfin.cpp.la.PETScSNESSolver attribute) (dolfin.cpp.la.PETScTAOSolver attribute) ParameterValue (class in dolfin.cpp.common) parent() (dolfin.cpp.fem.HierarchicalDirichletBC method) (dolfin.cpp.fem.HierarchicalErrorControl method) (dolfin.cpp.fem.HierarchicalForm method) (dolfin.cpp.fem.HierarchicalLinearVariationalProblem method) (dolfin.cpp.fem.HierarchicalNonlinearVariationalProblem method) (dolfin.cpp.function.Function method) (dolfin.cpp.function.FunctionSpace method) (dolfin.cpp.mesh.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalMeshFunctionBool method) (dolfin.cpp.mesh.HierarchicalMeshFunctionDouble method) (dolfin.cpp.mesh.HierarchicalMeshFunctionInt method) (dolfin.cpp.mesh.HierarchicalMeshFunctionSizet method) parse() (dolfin.cpp.common.Parameters method) part() (dolfin.cpp.fem.MultiMeshDofMap method) (dolfin.cpp.fem.MultiMeshForm method) (dolfin.cpp.function.MultiMeshFunction method) (dolfin.cpp.function.MultiMeshFunctionSpace method) (dolfin.cpp.mesh.MultiMesh method) PeriodicBoundaryComputation (class in dolfin.cpp.mesh) PeriodicBoundaryComputation_compute_periodic_pairs() (in module dolfin.cpp.mesh) PeriodicBoundaryComputation_masters_slaves() (in module dolfin.cpp.mesh) petsc_err_msg (dolfin.cpp.common.SubSystemsManager attribute) petsc_error() (dolfin.cpp.la.PETScObject static method) PETScBaseMatrix (class in dolfin.cpp.la) PETScFactory (class in dolfin.cpp.la) PETScFactory_instance() (in module dolfin.cpp.la) PETScKrylovSolver (class in dolfin.cpp.la) PETScKrylovSolver_default_parameters() (in module dolfin.cpp.la) PETScKrylovSolver_methods() (in module dolfin.cpp.la) PETScKrylovSolver_preconditioners() (in module dolfin.cpp.la) PETScLinearOperator (class in dolfin.cpp.la) PETScLUSolver (class in dolfin.cpp.la) PETScLUSolver_default_parameters() (in module dolfin.cpp.la) PETScLUSolver_methods() (in module dolfin.cpp.la) PETScMatrix (class in dolfin.cpp.la) PETScObject (class in dolfin.cpp.la) PETScObject_petsc_error() (in module dolfin.cpp.la)

PETScOptions (class in dolfin.cpp.la) PETScOptions_clear() (in module dolfin.cpp.la) PETScOptions_set() (in module dolfin.cpp.la) PETScPreconditioner (class in dolfin.cpp.la) PETScPreconditioner_preconditioners() (in module dolfin.cpp.la) PETScSNESSolver (class in dolfin.cpp.la) PETScSNESSolver_default_parameters() (in module dolfin.cpp.la) PETScSNESSolver_methods() (in module dolfin.cpp.la) PETScTAOSolver (class in dolfin.cpp.la) PETScTAOSolver_default_parameters() (in module dolfin.cpp.la) PETScTAOSolver_methods() (in module dolfin.cpp.la) PETScUserPreconditioner (class in dolfin.cpp.la) PETScVector (class in dolfin.cpp.la) plot() (dolfin.cpp.io.VTKPlotter method) (in module dolfin.common.plotting) (in module dolfin.cpp.io) Point (class in dolfin.cpp.mesh) point (dolfin.cpp.mesh.CellType attribute) point() (dolfin.cpp.function.Lagrange method) (dolfin.cpp.mesh.MeshGeometry method) (dolfin.cpp.mesh.Vertex method) point_coordinates() (dolfin.cpp.mesh.MeshGeometry method) PointIntegralSolver (class in dolfin.cpp.fem) (class in dolfin.multistage.multistagesolvers) PointIntegralSolver_default_parameters() (in module dolfin.cpp.fem) PointSource (class in dolfin.cpp.fem) pos() (dolfin.cpp.mesh.cells method) (dolfin.cpp.mesh.edges method) (dolfin.cpp.mesh.entities method) (dolfin.cpp.mesh.faces method) (dolfin.cpp.mesh.facets method) (dolfin.cpp.mesh.vertices method) preconditioners() (dolfin.cpp.la.EigenKrylovSolver static method) (dolfin.cpp.la.PETScKrylovSolver static method) (dolfin.cpp.la.PETScPreconditioner static method) (dolfin.cpp.la.TAOLinearBoundSolver static method) primary_dim (dolfin.cpp.la.TensorLayout attribute) primary_dim() (dolfin.cpp.la.SparsityPattern method) print_dofmap() (dolfin.cpp.function.FunctionSpace method) Progress (class in dolfin.cpp.common) project() (in module dolfin.fem.projection)

Q

quadrature_rule_cut_cell() (dolfin.cpp.mesh.MultiMesh method) quadrature_rule_cut_cells() (dolfin.cpp.mesh.MultiMesh method) quadrature_rule_interface() (dolfin.cpp.mesh.MultiMesh method)

quadrature_rule_overlap() (dolfin.cpp.mesh.MultiMesh method) quadrilateral (dolfin.cpp.mesh.CellType attribute)

R

radius_ratio() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method) radius_ratio_histogram_data() (dolfin.cpp.mesh.MeshQuality static method) radius_ratio_matplotlib_histogram() (dolfin.cpp.mesh.MeshQuality static method) radius_ratio_min_max() (dolfin.cpp.mesh.MeshQuality static method) radius_ratios() (dolfin.cpp.mesh.MeshQuality static method) rand() (in module dolfin.cpp.function) range_str() (dolfin.cpp.common.ParameterValue method) rank() (dolfin.cpp.common.MPI static method) (dolfin.cpp.fem.Form method) (dolfin.cpp.fem.MultiMeshForm method) (dolfin.cpp.la.GenericTensor method) (dolfin.cpp.la.SparsityPattern method) (dolfin.cpp.la.TensorLayout method) read() (dolfin.cpp.io.HDF5File method) (dolfin.cpp.io.XDMFFile method) rebalance() (dolfin.cpp.mesh.MeshHierarchy method) receive_mesh_data() (dolfin.cpp.mesh.LocalMeshData method) RectangleMesh (class in dolfin.cpp.mesh) refine() (dolfin.cpp.mesh.MeshHierarchy method) (in module dolfin.cpp.mesh) (in module dolfin.mesh.refinement) relative_residual() (dolfin.cpp.la.NewtonSolver method) remove() (dolfin.cpp.common.Parameters method) rename() (dolfin.cpp.common.Parameters method) (dolfin.cpp.common.Variable method) renumber_by_color() (dolfin.cpp.mesh.Mesh method) (dolfin.cpp.mesh.MeshRenumbering static method) reorder() (dolfin.cpp.mesh.LocalMeshData method) Representation_surface (dolfin.cpp.io.X3DOMParameters attribute) Representation_surface_with_edges (dolfin.cpp.io.X3DOMParameters attribute) Representation_wireframe (dolfin.cpp.io.X3DOMParameters attribute) rescale() (dolfin.cpp.mesh.MeshTransformation static method) reset() (dolfin.cpp.common.ParameterValue method) (dolfin.cpp.la.PETScVector method) reset_newton_solver() (dolfin.cpp.fem.PointIntegralSolver method)

reset_stage_solutions() (dolfin.cpp.fem.PointIntegralSolver method) residual() (dolfin.cpp.la.NewtonSolver method) (in module dolfin.cpp.la) residual_form() (dolfin.cpp.fem.NonlinearVariationalProblem method) residual_representation() (dolfin.cpp.fem.ErrorControl method) resize() (dolfin.cpp.la.EigenMatrix method) (dolfin.cpp.la.EigenVector method) responsible_mpi() (dolfin.cpp.common.SubSystemsManager static method) responsible_petsc() (dolfin.cpp.common.SubSystemsManager static method) restrict() (dolfin.cpp.function.GenericFunction method) resume() (dolfin.cpp.common.Timer method) retrieve() (dolfin.cpp.fem.TimeSeries method) rhs() (dolfin.cpp.fem.Equation method) rhs_form() (dolfin.multistage.multistagescheme.MultiStageScheme method) (dolfin.multistage.rushlarsenschemes.MultiStageScheme method) rhs_int() (dolfin.cpp.fem.Equation method) RK4 (in module dolfin.multistage.multistagescheme) RKSolver (class in dolfin.cpp.fem) (class in dolfin.multistage.multistagesolvers) RL1 (class in dolfin.multistage.rushlarsenschemes) RL2 (class in dolfin.multistage.rushlarsenschemes) rmax() (dolfin.cpp.mesh.Mesh method) rmin() (dolfin.cpp.mesh.Mesh method) root_node() (dolfin.cpp.fem.HierarchicalDirichletBC method) (dolfin.cpp.fem.HierarchicalErrorControl method) (dolfin.cpp.fem.HierarchicalForm method) (dolfin.cpp.fem.HierarchicalLinearVariationalProblem method) (dolfin.cpp.fem.HierarchicalNonlinearVariationalProblem method) (dolfin.cpp.function.Function method) (dolfin.cpp.function.FunctionSpace method) (dolfin.cpp.mesh.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalMeshFunctionBool method) (dolfin.cpp.mesh.HierarchicalMeshFunctionDouble method) (dolfin.cpp.mesh.HierarchicalMeshFunctionInt method) (dolfin.cpp.mesh.HierarchicalMeshFunctionSizet method) rotate() (dolfin.cpp.mesh.Mesh method) (dolfin.cpp.mesh.MeshTransformation static method) (dolfin.cpp.mesh.Point method) rows() (dolfin.cpp.la.CoordinateMatrix method) RushLarsenScheme (class in dolfin.multistage.rushlarsenschemes)

S

Scalar (class in dolfin.cpp.la) scheme() (dolfin.multistage.multistagesolvers.PointIntegralSolver method) (dolfin.multistage.multistagesolvers.RKSolver method) schur_approximation() (dolfin.cpp.la.BlockMatrix method) SCOTCH (class in dolfin.cpp.mesh) SCOTCH_compute_gps() (in module dolfin.cpp.mesh) seed() (in module dolfin.cpp.function) set() (dolfin.cpp.common.Table method) (dolfin.cpp.fem.GenericDofMap method) (dolfin.cpp.function.Lagrange method) (dolfin.cpp.la.GenericMatrix method) (dolfin.cpp.la.PETScOptions static method) (dolfin.cpp.la.PETScPreconditioner method) (dolfin.cpp.mesh.MeshGeometry method) set_all() (dolfin.cpp.mesh.MeshFunctionBool method) (dolfin.cpp.mesh.MeshFunctionDouble method) (dolfin.cpp.mesh.MeshFunctionInt method) (dolfin.cpp.mesh.MeshFunctionSizet method) set_allow_extrapolation() (dolfin.cpp.function.Function method) set_ambient_intensity() (dolfin.cpp.io.X3DOMParameters method) set_background_color() (dolfin.cpp.io.X3DOMParameters method) set_block() (dolfin.cpp.la.BlockMatrix method) (dolfin.cpp.la.BlockVector method) set_bounds() (dolfin.cpp.fem.NonlinearVariationalProblem method) set_cell_domains() (dolfin.cpp.fem.Form method) set_child() (dolfin.cpp.fem.HierarchicalDirichletBC method) (dolfin.cpp.fem.HierarchicalErrorControl method) (dolfin.cpp.fem.HierarchicalForm method) (dolfin.cpp.fem.HierarchicalFunction method) (dolfin.cpp.fem.HierarchicalFunctionSpace method) (dolfin.cpp.fem.HierarchicalLinearVariationalProblem method) (dolfin.cpp.fem.HierarchicalMesh method) (dolfin.cpp.fem.HierarchicalNonlinearVariationalProblem method) (dolfin.cpp.function.HierarchicalFunction method) (dolfin.cpp.function.HierarchicalFunctionSpace method) (dolfin.cpp.function.HierarchicalMesh method) (dolfin.cpp.io.HierarchicalFunction method) (dolfin.cpp.io.HierarchicalFunctionSpace method) (dolfin.cpp.io.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalFunction method) (dolfin.cpp.mesh.HierarchicalFunctionSpace method) (dolfin.cpp.mesh.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalMeshFunctionBool method) (dolfin.cpp.mesh.HierarchicalMeshFunctionDouble method) (dolfin.cpp.mesh.HierarchicalMeshFunctionInt method) (dolfin.cpp.mesh.HierarchicalMeshFunctionSizet method) (dolfin.cpp.mesh.HierarchicalMeshFunctionUInt method) set_coefficient() (dolfin.cpp.fem.Form method) set_coefficients() (dolfin.cpp.fem.Form method) set_color_map() (dolfin.cpp.io.X3DOMParameters method) set_coordinates() (dolfin.cpp.la.PETScPreconditioner method) (in module dolfin.cpp.fem) set_deflation_space() (dolfin.cpp.la.SLEPcEigenSolver method) set_diagonal() (dolfin.cpp.la.GenericMatrix method) set_diffuse_color() (dolfin.cpp.io.X3DOMParameters method) set_emissive_color() (dolfin.cpp.io.X3DOMParameters method) set_exterior_facet_domains() (dolfin.cpp.fem.Form method) set_fieldsplit() (dolfin.cpp.la.PETScPreconditioner method) set_from_options() (dolfin.cpp.la.PETScKrylovSolver method) (dolfin.cpp.la.PETScLUSolver method) (dolfin.cpp.la.PETScMatrix method) (dolfin.cpp.la.PETScSNESSolver method) (dolfin.cpp.la.PETScVector method) set_global_index() (dolfin.cpp.mesh.MeshTopology method) set_global_size() (dolfin.cpp.mesh.MeshConnectivity method) set_interior_facet_domains() (dolfin.cpp.fem.Form method) set_key() (dolfin.cpp.io.VTKPlotter method) set_ksp() (dolfin.cpp.la.TAOLinearBoundSolver method) set_local() (dolfin.cpp.la.EigenVector method) (dolfin.cpp.la.GenericMatrix method) (dolfin.cpp.la.GenericTensor method) (dolfin.cpp.la.GenericVector method) (dolfin.cpp.la.PETScVector method) (dolfin.cpp.la.Vector method) set_local_to_global() (dolfin.cpp.la.IndexMap method) set_log_active() (in module dolfin.cpp.common) set_log_level() (in module dolfin.cpp.common) set_marker() (dolfin.cpp.mesh.MeshDomains method) set_menu_display() (dolfin.cpp.io.X3DOMParameters method) set_mesh() (dolfin.cpp.fem.Form method) set_min_max() (dolfin.cpp.io.VTKPlotter method) set_mpi_atomicity() (dolfin.cpp.io.HDF5File method) set_near_nullspace() (dolfin.cpp.la.PETScMatrix method) set_nonzero_guess() (dolfin.cpp.la.PETScKrylovSolver method) set_norm_type() (dolfin.cpp.la.PETScKrylovSolver method) set_nullspace() (dolfin.cpp.la.PETScMatrix method) set_operator() (dolfin.cpp.la.EigenKrylovSolver method) (dolfin.cpp.la.EigenLUSolver method) (dolfin.cpp.la.GenericLinearSolver method) (dolfin.cpp.la.PETScLUSolver method) set_operators() (dolfin.cpp.la.EigenKrylovSolver method) (dolfin.cpp.la.GenericLinearSolver method) (dolfin.cpp.la.SLEPcEigenSolver method) set_options_prefix() (dolfin.cpp.la.PETScKrylovSolver method) (dolfin.cpp.la.PETScLUSolver method) (dolfin.cpp.la.PETScMatrix method) (dolfin.cpp.la.PETScSNESSolver method) (dolfin.cpp.la.PETScVector method) (dolfin.cpp.la.SLEPcEigenSolver method) set_output_stream() (in module dolfin.cpp.common) set_parent() (dolfin.cpp.fem.HierarchicalDirichletBC method) (dolfin.cpp.fem.HierarchicalErrorControl method) (dolfin.cpp.fem.HierarchicalForm method) (dolfin.cpp.fem.HierarchicalFunction method) (dolfin.cpp.fem.HierarchicalFunctionSpace method) (dolfin.cpp.fem.HierarchicalLinearVariationalProblem method) (dolfin.cpp.fem.HierarchicalMesh method) (dolfin.cpp.fem.HierarchicalNonlinearVariationalProblem method) (dolfin.cpp.function.HierarchicalFunction method) (dolfin.cpp.function.HierarchicalFunctionSpace method) (dolfin.cpp.function.HierarchicalMesh method) (dolfin.cpp.io.HierarchicalFunction method) (dolfin.cpp.io.HierarchicalFunctionSpace method) (dolfin.cpp.io.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalFunction method) (dolfin.cpp.mesh.HierarchicalFunctionSpace method) (dolfin.cpp.mesh.HierarchicalMesh method) (dolfin.cpp.mesh.HierarchicalMeshFunctionBool method) (dolfin.cpp.mesh.HierarchicalMeshFunctionDouble method) (dolfin.cpp.mesh.HierarchicalMeshFunctionInt method) (dolfin.cpp.mesh.HierarchicalMeshFunctionSizet method) (dolfin.cpp.mesh.HierarchicalMeshFunctionUInt method) set_range() (dolfin.cpp.common.Parameters method) (dolfin.cpp.common.ParameterValue method) set_representation() (dolfin.cpp.io.X3DOMParameters method) set_reuse_preconditioner() (dolfin.cpp.la.PETScKrylovSolver method) set_shininess() (dolfin.cpp.io.X3DOMParameters method) set_solver() (dolfin.cpp.la.TAOLinearBoundSolver method) set_some_coefficients() (dolfin.cpp.fem.Form method) set_specular_color() (dolfin.cpp.io.X3DOMParameters method) set_tolerances() (dolfin.cpp.la.PETScKrylovSolver method) set_transparency() (dolfin.cpp.io.X3DOMParameters method) set_type() (dolfin.cpp.la.PETScPreconditioner static method) set_value() (dolfin.cpp.fem.DirichletBC method) (dolfin.cpp.mesh.MeshFunctionBool method) (dolfin.cpp.mesh.MeshFunctionDouble method) (dolfin.cpp.mesh.MeshFunctionInt method) (dolfin.cpp.mesh.MeshFunctionSizet method) (dolfin.cpp.mesh.MeshValueCollectionBool method) (dolfin.cpp.mesh.MeshValueCollectionDouble method) (dolfin.cpp.mesh.MeshValueCollectionInt method) (dolfin.cpp.mesh.MeshValueCollectionSizet method) set_values() (dolfin.cpp.mesh.MeshFunctionBool method) (dolfin.cpp.mesh.MeshFunctionDouble method) (dolfin.cpp.mesh.MeshFunctionInt method) (dolfin.cpp.mesh.MeshFunctionSizet method) set_vertex_domains() (dolfin.cpp.fem.Form method) set_viewangle() (dolfin.cpp.io.VTKPlotter method) set_x() (dolfin.cpp.function.FunctionSpace method) set_x3d_stats() (dolfin.cpp.io.X3DOMParameters method) setrow() (dolfin.cpp.la.GenericMatrix method) setup() (dolfin.cpp.la.PETScUserPreconditioner static method) shared_entities() (dolfin.cpp.mesh.MeshTopology method)

shared_instance() (dolfin.cpp.la.LinearAlgebraObject method) (dolfin.cpp.la.LinearOperator method) (dolfin.cpp.la.Matrix method) (dolfin.cpp.la.Vector method) shared_nodes() (dolfin.cpp.fem.GenericDofMap method) sharing_processes() (dolfin.cpp.mesh.MeshEntity method) signature() (dolfin.cpp.fem.FiniteElement method) singe: form compiler options (in Cahn-Hilliard demo) singleton() (dolfin.cpp.common.SubSystemsManager static method) size() (dolfin.cpp.common.DoubleArray method) (dolfin.cpp.common.IndexSet method) (dolfin.cpp.common.IntArray method) (dolfin.cpp.common.MPI static method) (dolfin.cpp.common.UIntArray method) (dolfin.cpp.function.Lagrange method) (dolfin.cpp.la.BlockMatrix method) (dolfin.cpp.la.BlockVector method) (dolfin.cpp.la.CoordinateMatrix method) (dolfin.cpp.la.GenericLinearOperator method) (dolfin.cpp.la.GenericTensor method) (dolfin.cpp.la.GenericVector method) (dolfin.cpp.la.IndexMap method) (dolfin.cpp.la.LinearOperator method) (dolfin.cpp.la.PETScBaseMatrix method) (dolfin.cpp.la.PETScLinearOperator method) (dolfin.cpp.la.TensorLayout method) (dolfin.cpp.mesh.Mesh method) (dolfin.cpp.mesh.MeshConnectivity method) (dolfin.cpp.mesh.MeshFunctionBool method) (dolfin.cpp.mesh.MeshFunctionDouble method) (dolfin.cpp.mesh.MeshFunctionInt method) (dolfin.cpp.mesh.MeshFunctionSizet method) (dolfin.cpp.mesh.MeshHierarchy method) (dolfin.cpp.mesh.MeshTopology method) (dolfin.cpp.mesh.MeshValueCollectionBool method) (dolfin.cpp.mesh.MeshValueCollectionDouble method) (dolfin.cpp.mesh.MeshValueCollectionInt method) (dolfin.cpp.mesh.MeshValueCollectionSizet method) size_global() (dolfin.cpp.mesh.Mesh method) (dolfin.cpp.mesh.MeshConnectivity method) (dolfin.cpp.mesh.MeshTopology method) sizeof_la_index() (in module dolfin.cpp.common) SLEPcEigenSolver (class in dolfin.cpp.la) SLEPcEigenSolver_default_parameters() (in module dolfin.cpp.la) smooth() (dolfin.cpp.mesh.Mesh method) smooth_boundary() (dolfin.cpp.mesh.Mesh method) snap() (dolfin.cpp.mesh.SubDomain method) snap_boundary() (dolfin.cpp.mesh.Mesh method) snes() (dolfin.cpp.la.PETScSNESSolver method) solution() (dolfin.cpp.fem.LinearVariationalProblem method) (dolfin.cpp.fem.NonlinearVariationalProblem method) (dolfin.multistage.multistagescheme.MultiStageScheme method) (dolfin.multistage.rushlarsenschemes.MultiStageScheme method) solve() (dolfin.cpp.fem.GenericAdaptiveVariationalSolver method) (dolfin.cpp.fem.LinearVariationalSolver method) (dolfin.cpp.fem.NonlinearVariationalSolver method) (dolfin.cpp.la.EigenKrylovSolver method) (dolfin.cpp.la.EigenLUSolver method) (dolfin.cpp.la.GenericLUSolver method) (dolfin.cpp.la.GenericLinearSolver method) (dolfin.cpp.la.KrylovSolver method) (dolfin.cpp.la.LUSolver method) (dolfin.cpp.la.LinearSolver method) (dolfin.cpp.la.NewtonSolver method) (dolfin.cpp.la.PETScKrylovSolver method) (dolfin.cpp.la.PETScLUSolver method) (dolfin.cpp.la.PETScSNESSolver method) (dolfin.cpp.la.PETScTAOSolver method) (dolfin.cpp.la.PETScUserPreconditioner method) (dolfin.cpp.la.SLEPcEigenSolver method) (dolfin.cpp.la.TAOLinearBoundSolver method) (dolfin.fem.adaptivesolving.AdaptiveLinearVariationalSolver method) (dolfin.fem.adaptivesolving.AdaptiveNonlinearVariationalSolver method) (dolfin.fem.solving.LinearVariationalSolver method) (dolfin.fem.solving.NonlinearVariationalSolver method) (in module dolfin.fem.solving) solve_global_rhs() (dolfin.cpp.fem.LocalSolver method) solve_local() (dolfin.cpp.fem.LocalSolver method) solve_local_rhs() (dolfin.cpp.fem.LocalSolver method) solve_primal() (dolfin.cpp.fem.GenericAdaptiveVariationalSolver method) solve_transpose() (dolfin.cpp.la.EigenLUSolver method) (dolfin.cpp.la.GenericLUSolver method) (dolfin.cpp.la.GenericLinearSolver method) (dolfin.cpp.la.LUSolver method) (dolfin.cpp.la.PETScLUSolver method) SolverType_Cholesky (dolfin.cpp.fem.LocalSolver attribute) SolverType_LU (dolfin.cpp.fem.LocalSolver attribute) space_dimension() (dolfin.cpp.fem.FiniteElement method) sparray() (dolfin.cpp.la.EigenMatrix method) Sparsity_DENSE (dolfin.cpp.la.TensorLayout attribute) sparsity_pattern() (dolfin.cpp.la.TensorLayout method) Sparsity_SPARSE (dolfin.cpp.la.TensorLayout attribute) SparsityPattern (class in dolfin.cpp.la) SparsityPatternBuilder (class in dolfin.cpp.fem) SparsityPatternBuilder_build() (in module dolfin.cpp.fem) SparsityPatternBuilder_build_multimesh_sparsity_pattern() (in module dolfin.cpp.fem) SpatialCoordinate() (in module dolfin.functions.specialfunctions) SpecialFacetFunction (class in dolfin.cpp.function) SphericalShellMesh (class in dolfin.cpp.mesh) split functions split() (dolfin.functions.function.Function method) (dolfin.functions.functionspace.FunctionSpace method) sqr() (in module dolfin.common.math) squared_distance() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method) (dolfin.cpp.mesh.Facet method) (dolfin.cpp.mesh.Point method) squared_norm() (dolfin.cpp.mesh.Point method) stage_solutions() (dolfin.multistage.multistagescheme.MultiStageScheme method) (dolfin.multistage.rushlarsenschemes.MultiStageScheme method) start() (dolfin.cpp.common.Timer method) step() (dolfin.cpp.fem.PointIntegralSolver method) (dolfin.cpp.fem.RKSolver method) step_interval() (dolfin.cpp.fem.PointIntegralSolver method) (dolfin.cpp.fem.RKSolver method) stop() (dolfin.cpp.common.Timer method) store() (dolfin.cpp.fem.TimeSeries method) str() (dolfin.cpp.common.DoubleArray method) (dolfin.cpp.common.IntArray method) (dolfin.cpp.common.ParameterValue method) (dolfin.cpp.common.Parameters method) (dolfin.cpp.common.UIntArray method) (dolfin.cpp.common.Variable method) (dolfin.cpp.fem.MultiMeshDofMap method) (dolfin.cpp.io.HDF5Attribute method) (dolfin.cpp.io.X3DOM static method) (dolfin.cpp.la.BlockMatrix method) (dolfin.cpp.la.BlockVector method) (dolfin.cpp.la.LinearOperator method) (dolfin.cpp.la.SparsityPattern method) (dolfin.cpp.mesh.GenericBoundingBoxTree method) (dolfin.cpp.mesh.MeshConnectivity method) (dolfin.cpp.mesh.MeshEntity method) (dolfin.cpp.mesh.MeshGeometry method) (dolfin.cpp.mesh.MeshTopology method) (dolfin.cpp.mesh.Point method) (dolfin.functions.expression.Expression method) (dolfin.functions.function.Function method) str_latex() (dolfin.cpp.common.Table method) string2type() (dolfin.cpp.mesh.CellType static method) StringParameter (class in dolfin.cpp.common) sub() (dolfin.cpp.function.Function method) (dolfin.cpp.function.FunctionSpace method) (dolfin.cpp.function.MeshDisplacement method) (dolfin.functions.function.Function method) (dolfin.functions.functionspace.FunctionSpace method) SubDomain (class in dolfin.cpp.mesh) SubMesh (class in dolfin.cpp.mesh) SubsetIterator (class in dolfin.cpp.mesh) SubSystemsManager (class in dolfin.cpp.common) SubSystemsManager_finalize() (in module dolfin.cpp.common) SubSystemsManager_init_mpi() (in module dolfin.cpp.common) SubSystemsManager_init_petsc() (in module dolfin.cpp.common) SubSystemsManager_mpi_finalized() (in module dolfin.cpp.common) SubSystemsManager_mpi_initialized() (in module dolfin.cpp.common) SubSystemsManager_responsible_mpi() (in module dolfin.cpp.common) SubSystemsManager_responsible_petsc() (in module dolfin.cpp.common) SubSystemsManager_singleton() (in module dolfin.cpp.common) sum() (dolfin.cpp.common.MPI static method) (dolfin.cpp.la.EigenVector method) (dolfin.cpp.la.GenericVector method) (dolfin.cpp.la.PETScVector method) (dolfin.cpp.la.Vector method) summary() (dolfin.cpp.fem.GenericAdaptiveVariationalSolver method) SystemAssembler (class in dolfin.cpp.fem) (class in dolfin.fem.assembling)

T

t() (dolfin.multistage.multistagescheme.MultiStageScheme method) (dolfin.multistage.rushlarsenschemes.MultiStageScheme method) Table (class in dolfin.cpp.common) TableEntry (class in dolfin.cpp.common) tabulate_dof_coordinates() (dolfin.cpp.fem.FiniteElement method) (dolfin.cpp.function.FunctionSpace method) tabulate_entity_dofs() (dolfin.cpp.fem.GenericDofMap method) tabulate_facet_dofs() (dolfin.cpp.fem.GenericDofMap method) tabulate_global_dofs() (dolfin.cpp.fem.GenericDofMap method) tabulate_local_to_global_dofs() (dolfin.cpp.fem.GenericDofMap method) taking variations derivative tao() (dolfin.cpp.la.PETScTAOSolver method) (dolfin.cpp.la.TAOLinearBoundSolver method) TAOLinearBoundSolver (class in dolfin.cpp.la) TAOLinearBoundSolver_default_parameters() (in module dolfin.cpp.la) TAOLinearBoundSolver_krylov_solvers() (in module dolfin.cpp.la) TAOLinearBoundSolver_methods() (in module dolfin.cpp.la) TAOLinearBoundSolver_preconditioners() (in module dolfin.cpp.la) tear() (in module dolfin.fem.formmanipulations) TensorFunctionSpace() (in module dolfin.functions.functionspace) TensorLayout (class in dolfin.cpp.la) test_space() (dolfin.cpp.fem.LinearVariationalProblem method) (dolfin.cpp.fem.NonlinearVariationalProblem method) TestFunction TestFunction() (in module dolfin.functions.function) TestFunctions() (in module dolfin.functions.function) tetrahedron (dolfin.cpp.mesh.CellType attribute) thisown (dolfin.cpp.common.BoolParameter attribute) (dolfin.cpp.common.DoubleArray attribute) (dolfin.cpp.common.DoubleParameter attribute) (dolfin.cpp.common.Event attribute) (dolfin.cpp.common.GlobalParameters attribute) (dolfin.cpp.common.IndexSet attribute) (dolfin.cpp.common.IntArray attribute) (dolfin.cpp.common.IntParameter attribute) (dolfin.cpp.common.MPI attribute) (dolfin.cpp.common.MPIInfo attribute) (dolfin.cpp.common.MPI_Comm attribute) (dolfin.cpp.common.ParameterValue attribute) (dolfin.cpp.common.Parameters attribute) (dolfin.cpp.common.Progress attribute) (dolfin.cpp.common.StringParameter attribute) (dolfin.cpp.common.SubSystemsManager attribute) (dolfin.cpp.common.Table attribute) (dolfin.cpp.common.TableEntry attribute) (dolfin.cpp.common.Timer attribute) (dolfin.cpp.common.UIntArray attribute) (dolfin.cpp.common.Variable attribute) (dolfin.cpp.common.ufc_cell attribute) (dolfin.cpp.common.ufc_coordinate_mapping attribute) (dolfin.cpp.common.ufc_dofmap attribute) (dolfin.cpp.common.ufc_finite_element attribute) (dolfin.cpp.common.ufc_form attribute) (dolfin.cpp.common.ufc_function attribute) (dolfin.cpp.fem.AdaptiveLinearVariationalSolver attribute) (dolfin.cpp.fem.AdaptiveNonlinearVariationalSolver attribute) (dolfin.cpp.fem.Assembler attribute) (dolfin.cpp.fem.AssemblerBase attribute) (dolfin.cpp.fem.BasisFunction attribute) (dolfin.cpp.fem.DirichletBC attribute) (dolfin.cpp.fem.DiscreteOperators attribute) (dolfin.cpp.fem.DofMap attribute) (dolfin.cpp.fem.Equation attribute) (dolfin.cpp.fem.ErrorControl attribute) (dolfin.cpp.fem.Extrapolation attribute) (dolfin.cpp.fem.FiniteElement attribute) (dolfin.cpp.fem.Form attribute) (dolfin.cpp.fem.GenericAdaptiveVariationalSolver attribute) (dolfin.cpp.fem.GenericDofMap attribute) (dolfin.cpp.fem.HierarchicalDirichletBC attribute) (dolfin.cpp.fem.HierarchicalErrorControl attribute) (dolfin.cpp.fem.HierarchicalForm attribute) (dolfin.cpp.fem.HierarchicalFunction attribute) (dolfin.cpp.fem.HierarchicalFunctionSpace attribute) (dolfin.cpp.fem.HierarchicalLinearVariationalProblem attribute) (dolfin.cpp.fem.HierarchicalMesh attribute) (dolfin.cpp.fem.HierarchicalNonlinearVariationalProblem attribute) (dolfin.cpp.fem.LinearVariationalProblem attribute) (dolfin.cpp.fem.LinearVariationalSolver attribute) (dolfin.cpp.fem.LocalAssembler attribute) (dolfin.cpp.fem.LocalSolver attribute) (dolfin.cpp.fem.MultiMeshAssembler attribute) (dolfin.cpp.fem.MultiMeshDirichletBC attribute) (dolfin.cpp.fem.MultiMeshDofMap attribute) (dolfin.cpp.fem.MultiMeshForm attribute) (dolfin.cpp.fem.MultiStageScheme attribute) (dolfin.cpp.fem.NonlinearVariationalProblem attribute) (dolfin.cpp.fem.NonlinearVariationalSolver attribute) (dolfin.cpp.fem.OpenMpAssembler attribute) (dolfin.cpp.fem.PointIntegralSolver attribute) (dolfin.cpp.fem.PointSource attribute) (dolfin.cpp.fem.RKSolver attribute) (dolfin.cpp.fem.SparsityPatternBuilder attribute) (dolfin.cpp.fem.SystemAssembler attribute) (dolfin.cpp.fem.TimeSeries attribute) (dolfin.cpp.fem.ufc_cell attribute) (dolfin.cpp.fem.ufc_coordinate_mapping attribute) (dolfin.cpp.fem.ufc_dofmap attribute) (dolfin.cpp.fem.ufc_finite_element attribute) (dolfin.cpp.fem.ufc_form attribute) (dolfin.cpp.fem.ufc_function attribute) (dolfin.cpp.function.ALE attribute) (dolfin.cpp.function.Constant attribute) (dolfin.cpp.function.Expression attribute) (dolfin.cpp.function.FacetArea attribute) (dolfin.cpp.function.Function attribute) (dolfin.cpp.function.FunctionAXPY attribute) (dolfin.cpp.function.FunctionAssigner attribute) (dolfin.cpp.function.FunctionSpace attribute) (dolfin.cpp.function.GenericFunction attribute) (dolfin.cpp.function.HierarchicalFunction attribute) (dolfin.cpp.function.HierarchicalFunctionSpace attribute) (dolfin.cpp.function.HierarchicalMesh attribute) (dolfin.cpp.function.Lagrange attribute) (dolfin.cpp.function.LagrangeInterpolator attribute) (dolfin.cpp.function.Legendre attribute) (dolfin.cpp.function.MeshCoordinates attribute) (dolfin.cpp.function.MeshDisplacement attribute) (dolfin.cpp.function.MultiMeshFunction attribute) (dolfin.cpp.function.MultiMeshFunctionSpace attribute) (dolfin.cpp.function.MultiMeshSubSpace attribute) (dolfin.cpp.function.SpecialFacetFunction attribute) (dolfin.cpp.function.ufc_cell attribute) (dolfin.cpp.function.ufc_coordinate_mapping attribute) (dolfin.cpp.function.ufc_dofmap attribute) (dolfin.cpp.function.ufc_finite_element attribute) (dolfin.cpp.function.ufc_form attribute) (dolfin.cpp.function.ufc_function attribute) (dolfin.cpp.io.File attribute) (dolfin.cpp.io.GenericFile attribute) (dolfin.cpp.io.HDF5Attribute attribute) (dolfin.cpp.io.HDF5File attribute) (dolfin.cpp.io.HierarchicalFunction attribute) (dolfin.cpp.io.HierarchicalFunctionSpace attribute) (dolfin.cpp.io.HierarchicalMesh attribute) (dolfin.cpp.io.VTKPlotter attribute) (dolfin.cpp.io.X3DOM attribute) (dolfin.cpp.io.X3DOMParameters attribute) (dolfin.cpp.io.XDMFFile attribute) (dolfin.cpp.io.ufc_cell attribute) (dolfin.cpp.io.ufc_coordinate_mapping attribute) (dolfin.cpp.io.ufc_dofmap attribute) (dolfin.cpp.io.ufc_finite_element attribute) (dolfin.cpp.io.ufc_form attribute) (dolfin.cpp.io.ufc_function attribute) (dolfin.cpp.la.BlockMatrix attribute) (dolfin.cpp.la.BlockVector attribute) (dolfin.cpp.la.CoordinateMatrix attribute) (dolfin.cpp.la.DefaultFactory attribute) (dolfin.cpp.la.EigenFactory attribute) (dolfin.cpp.la.EigenKrylovSolver attribute) (dolfin.cpp.la.EigenLUSolver attribute) (dolfin.cpp.la.EigenMatrix attribute) (dolfin.cpp.la.EigenVector attribute) (dolfin.cpp.la.GenericLUSolver attribute) (dolfin.cpp.la.GenericLinearAlgebraFactory attribute) (dolfin.cpp.la.GenericLinearOperator attribute) (dolfin.cpp.la.GenericLinearSolver attribute) (dolfin.cpp.la.GenericMatrix attribute) (dolfin.cpp.la.GenericTensor attribute) (dolfin.cpp.la.GenericVector attribute) (dolfin.cpp.la.IndexMap attribute) (dolfin.cpp.la.KrylovSolver attribute) (dolfin.cpp.la.LUSolver attribute) (dolfin.cpp.la.LinearAlgebraObject attribute) (dolfin.cpp.la.LinearOperator attribute) (dolfin.cpp.la.LinearSolver attribute) (dolfin.cpp.la.Matrix attribute) (dolfin.cpp.la.NewtonSolver attribute) (dolfin.cpp.la.NonlinearProblem attribute) (dolfin.cpp.la.OptimisationProblem attribute) (dolfin.cpp.la.PETScBaseMatrix attribute) (dolfin.cpp.la.PETScFactory attribute) (dolfin.cpp.la.PETScKrylovSolver attribute) (dolfin.cpp.la.PETScLUSolver attribute) (dolfin.cpp.la.PETScLinearOperator attribute) (dolfin.cpp.la.PETScMatrix attribute) (dolfin.cpp.la.PETScObject attribute) (dolfin.cpp.la.PETScOptions attribute) (dolfin.cpp.la.PETScPreconditioner attribute) (dolfin.cpp.la.PETScSNESSolver attribute) (dolfin.cpp.la.PETScTAOSolver attribute) (dolfin.cpp.la.PETScUserPreconditioner attribute) (dolfin.cpp.la.PETScVector attribute) (dolfin.cpp.la.SLEPcEigenSolver attribute) (dolfin.cpp.la.Scalar attribute) (dolfin.cpp.la.SparsityPattern attribute) (dolfin.cpp.la.TAOLinearBoundSolver attribute) (dolfin.cpp.la.TensorLayout attribute) (dolfin.cpp.la.Vector attribute) (dolfin.cpp.la.VectorSpaceBasis attribute) (dolfin.cpp.la.ufc_cell attribute) (dolfin.cpp.la.ufc_coordinate_mapping attribute) (dolfin.cpp.la.ufc_dofmap attribute) (dolfin.cpp.la.ufc_finite_element attribute) (dolfin.cpp.la.ufc_form attribute) (dolfin.cpp.la.ufc_function attribute) (dolfin.cpp.mesh.BoostGraphOrdering attribute) (dolfin.cpp.mesh.BoundaryMesh attribute) (dolfin.cpp.mesh.BoundingBoxTree attribute) (dolfin.cpp.mesh.BoundingBoxTree3D attribute) (dolfin.cpp.mesh.BoxMesh attribute) (dolfin.cpp.mesh.Cell attribute) (dolfin.cpp.mesh.CellFunctionBool attribute) (dolfin.cpp.mesh.CellFunctionDouble attribute) (dolfin.cpp.mesh.CellFunctionInt attribute) (dolfin.cpp.mesh.CellFunctionSizet attribute) (dolfin.cpp.mesh.CellType attribute) (dolfin.cpp.mesh.DomainBoundary attribute) (dolfin.cpp.mesh.DynamicMeshEditor attribute) (dolfin.cpp.mesh.Edge attribute) (dolfin.cpp.mesh.EdgeFunctionBool attribute) (dolfin.cpp.mesh.EdgeFunctionDouble attribute) (dolfin.cpp.mesh.EdgeFunctionInt attribute) (dolfin.cpp.mesh.EdgeFunctionSizet attribute) (dolfin.cpp.mesh.Face attribute) (dolfin.cpp.mesh.FaceFunctionBool attribute) (dolfin.cpp.mesh.FaceFunctionDouble attribute) (dolfin.cpp.mesh.FaceFunctionInt attribute) (dolfin.cpp.mesh.FaceFunctionSizet attribute) (dolfin.cpp.mesh.Facet attribute) (dolfin.cpp.mesh.FacetCell attribute) (dolfin.cpp.mesh.FacetFunctionBool attribute) (dolfin.cpp.mesh.FacetFunctionDouble attribute) (dolfin.cpp.mesh.FacetFunctionInt attribute) (dolfin.cpp.mesh.FacetFunctionSizet attribute) (dolfin.cpp.mesh.GenericBoundingBoxTree attribute) (dolfin.cpp.mesh.Graph attribute) (dolfin.cpp.mesh.GraphBuilder attribute) (dolfin.cpp.mesh.HierarchicalFunction attribute) (dolfin.cpp.mesh.HierarchicalFunctionSpace attribute) (dolfin.cpp.mesh.HierarchicalMesh attribute) (dolfin.cpp.mesh.HierarchicalMeshFunctionBool attribute) (dolfin.cpp.mesh.HierarchicalMeshFunctionDouble attribute) (dolfin.cpp.mesh.HierarchicalMeshFunctionInt attribute) (dolfin.cpp.mesh.HierarchicalMeshFunctionSizet attribute) (dolfin.cpp.mesh.HierarchicalMeshFunctionUInt attribute) (dolfin.cpp.mesh.IntervalMesh attribute) (dolfin.cpp.mesh.LocalMeshData attribute) (dolfin.cpp.mesh.Mesh attribute) (dolfin.cpp.mesh.MeshColoring attribute) (dolfin.cpp.mesh.MeshConnectivity attribute) (dolfin.cpp.mesh.MeshData attribute) (dolfin.cpp.mesh.MeshDomains attribute) (dolfin.cpp.mesh.MeshEditor attribute) (dolfin.cpp.mesh.MeshEntity attribute) (dolfin.cpp.mesh.MeshFunctionBool attribute) (dolfin.cpp.mesh.MeshFunctionDouble attribute) (dolfin.cpp.mesh.MeshFunctionInt attribute) (dolfin.cpp.mesh.MeshFunctionSizet attribute) (dolfin.cpp.mesh.MeshGeometry attribute) (dolfin.cpp.mesh.MeshHierarchy attribute) (dolfin.cpp.mesh.MeshPartitioning attribute) (dolfin.cpp.mesh.MeshPointIntersection attribute) (dolfin.cpp.mesh.MeshQuality attribute) (dolfin.cpp.mesh.MeshRenumbering attribute) (dolfin.cpp.mesh.MeshTopology attribute) (dolfin.cpp.mesh.MeshTransformation attribute) (dolfin.cpp.mesh.MeshValueCollectionBool attribute) (dolfin.cpp.mesh.MeshValueCollectionDouble attribute) (dolfin.cpp.mesh.MeshValueCollectionInt attribute) (dolfin.cpp.mesh.MeshValueCollectionSizet attribute) (dolfin.cpp.mesh.MultiMesh attribute) (dolfin.cpp.mesh.PeriodicBoundaryComputation attribute) (dolfin.cpp.mesh.Point attribute) (dolfin.cpp.mesh.RectangleMesh attribute) (dolfin.cpp.mesh.SCOTCH attribute) (dolfin.cpp.mesh.SphericalShellMesh attribute) (dolfin.cpp.mesh.SubDomain attribute) (dolfin.cpp.mesh.SubMesh attribute) (dolfin.cpp.mesh.SubsetIterator attribute) (dolfin.cpp.mesh.UnitCubeMesh attribute) (dolfin.cpp.mesh.UnitDiscMesh attribute) (dolfin.cpp.mesh.UnitHexMesh attribute) (dolfin.cpp.mesh.UnitIntervalMesh attribute) (dolfin.cpp.mesh.UnitQuadMesh attribute) (dolfin.cpp.mesh.UnitSquareMesh attribute) (dolfin.cpp.mesh.UnitTetrahedronMesh attribute) (dolfin.cpp.mesh.UnitTriangleMesh attribute) (dolfin.cpp.mesh.Vertex attribute) (dolfin.cpp.mesh.VertexFunctionBool attribute) (dolfin.cpp.mesh.VertexFunctionDouble attribute) (dolfin.cpp.mesh.VertexFunctionInt attribute) (dolfin.cpp.mesh.VertexFunctionSizet attribute) (dolfin.cpp.mesh.cells attribute) (dolfin.cpp.mesh.edges attribute) (dolfin.cpp.mesh.entities attribute) (dolfin.cpp.mesh.faces attribute) (dolfin.cpp.mesh.facets attribute) (dolfin.cpp.mesh.ufc_cell attribute) (dolfin.cpp.mesh.ufc_coordinate_mapping attribute) (dolfin.cpp.mesh.ufc_dofmap attribute) (dolfin.cpp.mesh.ufc_finite_element attribute) (dolfin.cpp.mesh.ufc_form attribute) (dolfin.cpp.mesh.ufc_function attribute) (dolfin.cpp.mesh.vertices attribute) (dolfin.fem.solving.LinearVariationalSolver attribute) (dolfin.fem.solving.NonlinearVariationalSolver attribute) tic() (in module dolfin.cpp.common) Time (class in dolfin.common.time) time() (in module dolfin.cpp.common) Timer (class in dolfin.cpp.common) TimeSeries (class in dolfin.cpp.fem) TimeSeries_default_parameters() (in module dolfin.cpp.fem) timing() (in module dolfin.cpp.common)

timings() (in module dolfin.cpp.common) to_adm() (dolfin.multistage.multistagescheme.ButcherMultiStageScheme method) (dolfin.multistage.multistagescheme.MultiStageScheme method) (dolfin.multistage.rushlarsenschemes.MultiStageScheme method) (dolfin.multistage.rushlarsenschemes.RushLarsenScheme method) to_dict() (dolfin.cpp.common.Parameters method) (dolfin.cpp.io.HDF5Attribute method) to_key() (dolfin.cpp.io.VTKPlotter static method) to_tlm() (dolfin.multistage.multistagescheme.ButcherMultiStageScheme method) (dolfin.multistage.multistagescheme.MultiStageScheme method) (dolfin.multistage.rushlarsenschemes.MultiStageScheme method) (dolfin.multistage.rushlarsenschemes.RushLarsenScheme method) toc() (in module dolfin.cpp.common) topological_dimension (dolfin.cpp.common.ufc_cell attribute) (dolfin.cpp.fem.ufc_cell attribute) (dolfin.cpp.function.ufc_cell attribute) (dolfin.cpp.io.ufc_cell attribute) (dolfin.cpp.la.ufc_cell attribute) (dolfin.cpp.mesh.ufc_cell attribute) topological_dimension() (dolfin.cpp.fem.FiniteElement method) topology (dolfin.cpp.mesh.LocalMeshData attribute) topology() (dolfin.cpp.mesh.Mesh method) translate() (dolfin.cpp.mesh.Mesh method) (dolfin.cpp.mesh.MeshTransformation static method) transpmult() (dolfin.cpp.la.GenericMatrix method) trial_space() (dolfin.cpp.fem.LinearVariationalProblem method) (dolfin.cpp.fem.NonlinearVariationalProblem method) TrialFunction TrialFunction() (in module dolfin.functions.function) TrialFunctions() (in module dolfin.functions.function) triangle (dolfin.cpp.mesh.CellType attribute) triangulate_intersection() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method) type() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.Mesh method) type2string() (dolfin.cpp.mesh.CellType static method) Type_binary (dolfin.cpp.io.File attribute) Type_raw (dolfin.cpp.io.File attribute) Type_sorted (dolfin.cpp.la.SparsityPattern attribute) type_str() (dolfin.cpp.common.ParameterValue method) (dolfin.cpp.io.HDF5Attribute method) Type_svg (dolfin.cpp.io.File attribute) type_to_dim() (dolfin.cpp.mesh.MeshColoring static method) Type_unsorted (dolfin.cpp.la.SparsityPattern attribute) Type_vtk (dolfin.cpp.io.File attribute) Type_x3d (dolfin.cpp.io.File attribute) Type_xml (dolfin.cpp.io.File attribute) Type_xyz (dolfin.cpp.io.File attribute)

U

ufc_cell (class in dolfin.cpp.common) (class in dolfin.cpp.fem) (class in dolfin.cpp.function) (class in dolfin.cpp.io) (class in dolfin.cpp.la) (class in dolfin.cpp.mesh) ufc_coordinate_mapping (class in dolfin.cpp.common) (class in dolfin.cpp.fem) (class in dolfin.cpp.function) (class in dolfin.cpp.io) (class in dolfin.cpp.la) (class in dolfin.cpp.mesh) ufc_dofmap (class in dolfin.cpp.common) (class in dolfin.cpp.fem) (class in dolfin.cpp.function) (class in dolfin.cpp.io) (class in dolfin.cpp.la) (class in dolfin.cpp.mesh) ufc_element() (dolfin.cpp.fem.FiniteElement method) ufc_finite_element (class in dolfin.cpp.common) (class in dolfin.cpp.fem) (class in dolfin.cpp.function) (class in dolfin.cpp.io) (class in dolfin.cpp.la) (class in dolfin.cpp.mesh) ufc_form (class in dolfin.cpp.common) (class in dolfin.cpp.fem) (class in dolfin.cpp.function) (class in dolfin.cpp.io) (class in dolfin.cpp.la) (class in dolfin.cpp.mesh) ufc_form() (dolfin.cpp.fem.Form method) ufc_function (class in dolfin.cpp.common) (class in dolfin.cpp.fem) (class in dolfin.cpp.function) (class in dolfin.cpp.io) (class in dolfin.cpp.la) (class in dolfin.cpp.mesh) ufc_signature() (in module dolfin.cpp.common) ufl_cell() (dolfin.cpp.mesh.Mesh method) (dolfin.functions.functionspace.FunctionSpace method) ufl_coordinate_element() (dolfin.cpp.mesh.Mesh method) ufl_domain() (dolfin.cpp.mesh.Mesh method) ufl_evaluate() (dolfin.functions.expression.Expression method) (dolfin.functions.function.Function method) ufl_function_space() (dolfin.functions.functionspace.FunctionSpace method) ufl_id() (dolfin.cpp.mesh.Mesh method) (dolfin.cpp.mesh.MeshFunctionBool method) (dolfin.cpp.mesh.MeshFunctionDouble method) (dolfin.cpp.mesh.MeshFunctionInt method) (dolfin.cpp.mesh.MeshFunctionSizet method) ufl_stage_forms() (dolfin.multistage.multistagescheme.MultiStageScheme method) (dolfin.multistage.rushlarsenschemes.MultiStageScheme method) UIntArray (class in dolfin.cpp.common)

uncut_cells() (dolfin.cpp.mesh.MultiMesh method) UnitCubeMesh (class in dolfin.cpp.mesh) UnitDiscMesh (class in dolfin.cpp.mesh) UnitHexMesh (class in dolfin.cpp.mesh) UnitIntervalMesh (class in dolfin.cpp.mesh) UnitQuadMesh (class in dolfin.cpp.mesh) UnitSquareMesh (class in dolfin.cpp.mesh) UnitTetrahedronMesh (class in dolfin.cpp.mesh) UnitTriangleMesh (class in dolfin.cpp.mesh) unrefine() (dolfin.cpp.mesh.MeshHierarchy method) update() (dolfin.cpp.common.Parameters method) (dolfin.cpp.common.Progress method) (dolfin.cpp.function.GenericFunction method) update_ghost_values() (dolfin.cpp.la.PETScVector method) update_index() (dolfin.cpp.fem.BasisFunction method) update_parameters() (dolfin.cpp.la.GenericLinearSolver method) upper_bound() (dolfin.cpp.fem.NonlinearVariationalProblem method) usage() (in module dolfin.mesh.boundarysubdomainfinder) user_sub_domain() (dolfin.cpp.fem.DirichletBC method)

V

value() (dolfin.cpp.common.ParameterValue method) (dolfin.cpp.fem.DirichletBC method) value_dimension() (dolfin.cpp.fem.FiniteElement method) (dolfin.cpp.function.GenericFunction method) value_rank() (dolfin.cpp.fem.FiniteElement method) (dolfin.cpp.function.GenericFunction method) value_shape() (dolfin.functions.expression.Expression method) value_size() (dolfin.cpp.function.GenericFunction method) value_str() (dolfin.cpp.common.ParameterValue method) values() (dolfin.cpp.common.Parameters method) (dolfin.cpp.function.Constant method) (dolfin.cpp.io.HDF5Attribute method) (dolfin.cpp.la.CoordinateMatrix method) (dolfin.cpp.mesh.MeshValueCollectionBool method) (dolfin.cpp.mesh.MeshValueCollectionDouble method) (dolfin.cpp.mesh.MeshValueCollectionInt method) (dolfin.cpp.mesh.MeshValueCollectionSizet method) Variable (class in dolfin.cpp.common) vec() (dolfin.cpp.la.EigenVector method) (dolfin.cpp.la.PETScVector method) Vector (class in dolfin.cpp.la) vector() (dolfin.cpp.function.Function method) (dolfin.cpp.function.MultiMeshFunction method) vector_times() (dolfin.cpp.fem.TimeSeries method) VectorFunctionSpace VectorFunctionSpace() (in module dolfin.functions.functionspace) VectorSpaceBasis (class in dolfin.cpp.la) Vertex (class in dolfin.cpp.mesh)

vertex_coordinates() (dolfin.cpp.mesh.MeshGeometry method) vertex_domains() (dolfin.cpp.fem.Form method) vertex_to_dof_map() (in module dolfin.cpp.fem) VertexFunction (class in dolfin.cpp.mesh) VertexFunctionBool (class in dolfin.cpp.mesh) VertexFunctionDouble (class in dolfin.cpp.mesh) VertexFunctionInt (class in dolfin.cpp.mesh) VertexFunctionSizet (class in dolfin.cpp.mesh) vertices (class in dolfin.cpp.mesh) view() (dolfin.cpp.function.MultiMeshFunctionSpace method) volume() (dolfin.cpp.mesh.Cell method) (dolfin.cpp.mesh.CellType method) vtk_mapping() (dolfin.cpp.mesh.CellType method) VTKPlotter (class in dolfin.cpp.io) VTKPlotter_all_interactive() (in module dolfin.cpp.io) VTKPlotter_default_parameters() (in module dolfin.cpp.io) VTKPlotter_to_key() (in module dolfin.cpp.io)

W

warn_once() (dolfin.cpp.common.ParameterValue method) warning() (in module dolfin.cpp.common) weight() (dolfin.cpp.mesh.MeshHierarchy method) write() (dolfin.cpp.io.HDF5File method) (dolfin.cpp.io.XDMFFile method)

write_file() (in module dolfin.mesh.boundarysubdomainfinder) write_pdf() (dolfin.cpp.io.VTKPlotter method) write_png() (dolfin.cpp.io.VTKPlotter method)

X

x() (dolfin.cpp.mesh.MeshGeometry method) (dolfin.cpp.mesh.Point method) (dolfin.cpp.mesh.Vertex method) X3DOM (class in dolfin.cpp.io) X3DOM_html() (in module dolfin.cpp.io)

X3DOM_str() (in module dolfin.cpp.io) X3DOMParameters (class in dolfin.cpp.io) XDMFFile (class in dolfin.cpp.io)

Y

y() (dolfin.cpp.mesh.Point method)

Z

z() (dolfin.cpp.mesh.Point method) zero() (dolfin.cpp.fem.DirichletBC method) (dolfin.cpp.la.BlockMatrix method) (dolfin.cpp.la.EigenMatrix method) (dolfin.cpp.la.GenericMatrix method) (dolfin.cpp.la.GenericTensor method) (dolfin.cpp.la.Matrix method) (dolfin.cpp.la.PETScMatrix method) zero_columns() (dolfin.cpp.fem.DirichletBC method)

zero_local() (dolfin.cpp.la.GenericMatrix method) zoom() (dolfin.cpp.io.VTKPlotter method)