Source: clustalx
Section: non-free/science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
DM-Upload-Allowed: yes
Uploaders: Steffen Moeller <moeller@debian.org>, Charles Plessy <plessy@debian.org>,
 Andreas Tille <tille@debian.org>
Build-Depends: debhelper (>= 7.0.50~), libqt4-dev, quilt
Standards-Version: 3.9.1
Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/clustalx/trunk/?rev=0&sc=0
Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/clustalx/trunk/
XS-Autobuild: yes
Homepage: http://www.clustal.org/

Package: clustalx
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
Suggests: clustalw, texshade|texlive-latex-extra, boxshade
Description: Multiple alignment of nucleic acid and protein sequences (graphical interface)
 This package offers a GUI interface for the Clustal multiple sequence
 alignment program. It provides an integrated environment for performing
 multiple sequence- and profile-alignments to analyse the results.
 The sequence alignment is displayed in a window on the screen.
 A versatile coloring scheme has been incorporated to highlight conserved
 features in the alignment. For professional presentations, one should
 use the texshade LaTeX package or boxshade.
 .
 The pull-down menus at the top of the window allow you to select all the
 options required for traditional multiple sequence and profile alignment.
 You can cut-and-paste sequences to change the order of the alignment; you can
 select a subset of sequences to be aligned; you can select a sub-range of the
 alignment to be realigned and inserted back into the original alignment.
 .
 An alignment quality analysis can be performed and low-scoring segments or
 exceptional residues can be highlighted.
